RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 P2RY2P41231 377 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 NUDT6P53370 316 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 SIM1P81133 766 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-218ENST00000610726 MRPL28Q13084 256 aaKnown RBP6.99□□□□□ -1.29
CSDE1-218ENST00000610726 CCNIQ14094 377 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 SLC14A2Q15849 920 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 NNATQ16517 81 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 KCTD21Q4G0X4 260 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 PERM1Q5SV97 790 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 C10orf62Q5T681 223 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-218ENST00000610726 REEP3Q6NUK4 255 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 PARM1Q6UWI2 310 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 TMC8Q8IU68 726 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 MINDY1Q8N5J2 469 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 ZNF480Q8WV37 535 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 ASB11Q8WXH4 323 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 TOE1Q96GM8 510 aaKnown RBP6.99□□□□□ -1.29
CSDE1-218ENST00000610726 JSRP1Q96MG2 331 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-218ENST00000610726 FCRL4Q96PJ5 515 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 HMG20AQ9NP66 347 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 THUMPD1Q9NXG2 353 aaKnown RBP6.99□□□□□ -1.29
CSDE1-218ENST00000610726 EHD3Q9NZN3 535 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 MKL2Q9ULH7 1088 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 OR5K4A6NMS3 321 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 STX11O75558 287 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 SOX14O95416 240 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 IGLV3-27P01718 113 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 OR12D1P0DN82 309 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 MAGP20916 626 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 RNF144AP50876 292 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-218ENST00000610726 OLR1P78380 273 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 LGALS3BPQ08380 585 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 DCTN2Q13561 401 aaKnown RBP6.99□□□□□ -1.29
CSDE1-218ENST00000610726 IRF4Q15306 451 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 FAM91A1Q658Y4 838 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 CD300LGQ6UXG3 332 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 KCTD8Q6ZWB6 473 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 LARP4Q71RC2 724 aaKnown RBP eCLIP6.99□□□□□ -1.292e-8■■■□□ 15.4
CSDE1-218ENST00000610726 RASGRP3Q8IV61 690 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 KLHDC8AQ8IYD2 350 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 SCAIQ8N9R8 606 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 AVL9Q8NBF6 648 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 OR8J3Q8NGG0 315 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 FBXL20Q96IG2 436 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 ASB16Q96NS5 453 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 DEPDC7Q96QD5 511 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 COPS4Q9BT78 406 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 MAP10Q9P2G4 905 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 GPR34Q9UPC5 381 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 PCDHGA4Q9Y5G9 962 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 PCDHGA2Q9Y5H1 932 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 COMMD3-BMI1R4GMX3 469 aa6.99□□□□□ -1.29
CSDE1-218ENST00000610726 FAM92AA1XBS5 289 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 ARHGEF9O43307 516 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 PENKP01210 267 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-218ENST00000610726 ETFAP13804 333 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 PSMD4P55036 377 aaKnown RBP6.98□□□□□ -1.29
CSDE1-218ENST00000610726 MADCAM1Q13477 382 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 TRIQKQ629K1 86 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 ZNF57Q68EA5 555 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-218ENST00000610726 GJD3Q8N144 294 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 ZNF483Q8TF39 744 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-218ENST00000610726 MAL2Q969L2 176 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 ZUFSPQ96AP4 578 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 MRPL38Q96DV4 380 aaKnown RBP6.98□□□□□ -1.29
CSDE1-218ENST00000610726 CHCHD6Q9BRQ6 235 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 SLC6A17Q9H1V8 727 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 ADAM30Q9UKF2 790 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 IKZF2Q9UKS7 526 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 SSR3Q9UNL2 185 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 ZNF451Q9Y4E5 1061 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 MICAL3Q7RTP6 2002 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 LOXHD1Q8IVV2 1947 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 DOCK5Q9H7D0 1870 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 HTRA2O43464 458 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-218ENST00000610726 CH25HO95992 272 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 TCF3P15923 654 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 FPR1P21462 350 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 PSMB5P28074 263 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 HOXA9P31269 272 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 ITGA1P56199 1179 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 ABATP80404 500 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 RPA4Q13156 261 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 RSBN1Q5VWQ0 802 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-218ENST00000610726 ATG9BQ674R7 924 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 ANKRD54Q6NXT1 300 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 FIGLAQ6QHK4 219 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 FAM92BQ6ZTR7 304 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 NEK10Q6ZWH5 1172 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 FAM220AQ7Z4H9 259 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 ADGRD2Q7Z7M1 963 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 LSMEM2Q8N112 164 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 OR56A1Q8NGH5 318 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 OR5M3Q8NGP4 307 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 PTCHD1Q96NR3 888 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 BIRC8Q96P09 236 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 PKMYT1Q99640 499 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 IFT27Q9BW83 186 aa6.98□□□□□ -1.29
CSDE1-218ENST00000610726 SORBS1Q9BX66 1292 aaKnown RBP6.98□□□□□ -1.29
CSDE1-218ENST00000610726 ACPTQ9BZG2 426 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms