RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 LEF1Q9UJU2 399 aaPredicted RBP21.19■□□□□ 0.98
ATG4D-209ENST00000588857 SCN3AQ9NY46 2000 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 MN1Q10571 1320 aaPredicted RBP21.19■□□□□ 0.98
ATG4D-209ENST00000588857 A0A0G2JN53 185 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 CFAP73A6NFT4 308 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 P2RX6O15547 441 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 ITGAXP20702 1163 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 CSF2RBP32927 897 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 S100A3P33764 101 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 GRK6P43250 576 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 TSFMP43897 325 aaKnown RBP21.19■□□□□ 0.98
ATG4D-209ENST00000588857 ARL4DP49703 201 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 LIMK1P53667 647 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 VSX2P58304 361 aaPredicted RBP21.19■□□□□ 0.98
ATG4D-209ENST00000588857 C21orf58P58505 322 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 TAS2R50P59544 299 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 CFHR1Q03591 330 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 DPY19L1Q2PZI1 675 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 PGS1Q32NB8 556 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 SPANXN4Q5MJ08 99 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 IKBIPQ70UQ0 350 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 DSELQ8IZU8 1212 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 DNAJC22Q8N4W6 341 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 CSNK1A1LQ8N752 337 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 PRPF18Q99633 342 aaKnown RBP21.19■□□□□ 0.98
ATG4D-209ENST00000588857 CHRNA10Q9GZZ6 450 aa21.19■□□□□ 0.98
ATG4D-209ENST00000588857 WBP11Q9Y2W2 641 aaKnown RBP21.19■□□□□ 0.98
ATG4D-209ENST00000588857 SLC30A4O14863 429 aa21.18■□□□□ 0.98
ATG4D-209ENST00000588857 ZSCAN9O15535 394 aaPredicted RBP21.18■□□□□ 0.98
ATG4D-209ENST00000588857 SH3BP5O60239 455 aa21.18■□□□□ 0.98
ATG4D-209ENST00000588857 PGRP06401 933 aa21.18■□□□□ 0.98
ATG4D-209ENST00000588857 COX7A2P14406 83 aa21.18■□□□□ 0.98
ATG4D-209ENST00000588857 GSTM5P46439 218 aa21.18■□□□□ 0.98
ATG4D-209ENST00000588857 RAB8AP61006 207 aa21.18■□□□□ 0.98
ATG4D-209ENST00000588857 SNAP47Q5SQN1 464 aa21.18■□□□□ 0.98
ATG4D-209ENST00000588857 ROPN1LQ96C74 230 aa21.18■□□□□ 0.98
ATG4D-209ENST00000588857 TEFMQ96QE5 360 aaKnown RBP21.18■□□□□ 0.98
ATG4D-209ENST00000588857 RAB3IPQ96QF0 476 aaPredicted RBP21.18■□□□□ 0.98
ATG4D-209ENST00000588857 COPS7BQ9H9Q2 264 aaPredicted RBP21.18■□□□□ 0.98
ATG4D-209ENST00000588857 PRDM7Q9NQW5 492 aa21.18■□□□□ 0.98
ATG4D-209ENST00000588857 BTBD3Q9Y2F9 522 aa21.18■□□□□ 0.98
ATG4D-209ENST00000588857 RRP15Q9Y3B9 282 aaKnown RBP21.18■□□□□ 0.98
ATG4D-209ENST00000588857 TXNDC9O14530 226 aa21.17■□□□□ 0.98
ATG4D-209ENST00000588857 SCAMP2O15127 329 aaKnown RBP21.17■□□□□ 0.98
ATG4D-209ENST00000588857 GSC2O15499 205 aa21.17■□□□□ 0.98
ATG4D-209ENST00000588857 SRPX2O60687 465 aaPredicted RBP21.17■□□□□ 0.98
ATG4D-209ENST00000588857 KLHL18O94889 574 aa21.17■□□□□ 0.98
ATG4D-209ENST00000588857 RPLP0P05388 317 aaKnown RBP21.17■□□□□ 0.98
ATG4D-209ENST00000588857 ZNF888P0CJ79 500 aaPredicted RBP21.17■□□□□ 0.98
ATG4D-209ENST00000588857 HIST1H1TP22492 207 aaPredicted RBP21.17■□□□□ 0.98
ATG4D-209ENST00000588857 RPL3P39023 403 aaKnown RBP21.17■□□□□ 0.98
ATG4D-209ENST00000588857 SRSF11Q05519 484 aaKnown RBP21.17■□□□□ 0.98
ATG4D-209ENST00000588857 C2orf80Q0P641 193 aa21.17■□□□□ 0.98
ATG4D-209ENST00000588857 SQSTM1Q13501 440 aa21.17■□□□□ 0.98
ATG4D-209ENST00000588857 TLR1Q15399 786 aa21.17■□□□□ 0.98
ATG4D-209ENST00000588857 DEFB110Q30KQ9 67 aa21.17■□□□□ 0.98
ATG4D-209ENST00000588857 ABHD13Q7L211 337 aa21.17■□□□□ 0.98
ATG4D-209ENST00000588857 RETREG3Q86VR2 466 aa21.17■□□□□ 0.98
ATG4D-209ENST00000588857 DEFB107AQ8IZN7 70 aa21.17■□□□□ 0.98
ATG4D-209ENST00000588857 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.17■□□□□ 0.98
ATG4D-209ENST00000588857 IFI44Q8TCB0 444 aa21.17■□□□□ 0.98
ATG4D-209ENST00000588857 OR52E6Q96RD3 313 aa21.17■□□□□ 0.98
ATG4D-209ENST00000588857 CADM1Q9BY67 442 aaKnown RBP21.17■□□□□ 0.98
ATG4D-209ENST00000588857 ROGDIQ9GZN7 287 aa21.17■□□□□ 0.98
ATG4D-209ENST00000588857 GID8Q9NWU2 228 aa21.17■□□□□ 0.98
ATG4D-209ENST00000588857 PLCL2Q9UPR0 1127 aa21.17■□□□□ 0.98
ATG4D-209ENST00000588857 A0A0A6YYD5 115 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 FLRT2O43155 660 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 TRA2BP62995 288 aaKnown RBP21.16■□□□□ 0.98
ATG4D-209ENST00000588857 KCNJ2P63252 427 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 BTN3A2P78410 334 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 HSD11B2P80365 405 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 SLC9A5Q14940 896 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 MAPKAPK3Q16644 382 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 STPG1Q5TH74 334 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 HACD2Q6Y1H2 254 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 R3HCC1LQ7Z5L2 792 aaKnown RBP21.16■□□□□ 0.98
ATG4D-209ENST00000588857 ARHGAP24Q8N264 748 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 ACOT4Q8N9L9 421 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 OR7A2PQ8NGA2 310 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 OR8K5Q8NH50 307 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 ZCCHC10Q8TBK6 192 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 UTP15Q8TED0 518 aaKnown RBP21.16■□□□□ 0.98
ATG4D-209ENST00000588857 N4BP2L2Q92802 583 aaPredicted RBP21.16■□□□□ 0.98
ATG4D-209ENST00000588857 NUDT22Q9BRQ3 303 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 EDEM2Q9BV94 578 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 REEP4Q9H6H4 257 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 WDR41Q9HAD4 459 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 TMEM9Q9P0T7 183 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 MAP10Q9P2G4 905 aa21.16■□□□□ 0.98
ATG4D-209ENST00000588857 A0A088AWK7 358 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 ASPDHA6ND91 283 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 C4orf51C9J302 202 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 HCRTR1O43613 425 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 CPNE6O95741 557 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 IL3P08700 152 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 NQO1P15559 274 aaKnown RBP21.15■□□□□ 0.98
ATG4D-209ENST00000588857 ZNF10P21506 573 aaPredicted RBP21.15■□□□□ 0.98
ATG4D-209ENST00000588857 ATP5A1P25705 553 aaKnown RBP21.15■□□□□ 0.98
ATG4D-209ENST00000588857 PGM1P36871 562 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms