RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 BARD1Q99728 777 aaKnown RBP18.82■□□□□ 0.6
TRAPPC6A-203ENST00000587818 VPS11Q9H270 941 aa18.82■□□□□ 0.6
TRAPPC6A-203ENST00000587818 ACSS3Q9H6R3 686 aa18.82■□□□□ 0.6
TRAPPC6A-203ENST00000587818 AGPAT4Q9NRZ5 378 aa18.82■□□□□ 0.6
TRAPPC6A-203ENST00000587818 CPAMD8Q8IZJ3 1885 aa18.82■□□□□ 0.6
TRAPPC6A-203ENST00000587818 A0A087X1B8 175 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 ANKUB1A6NFN9 424 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 LRRC14BA6NHZ5 514 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 KERAO60938 352 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 CLEC3AO75596 197 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 MTHFD2P13995 350 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 JAK1P23458 1154 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 ECHS1P30084 290 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 SLC26A5P58743 744 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 NIPAL1Q6NVV3 410 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 CRLF3Q8IUI8 442 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 BEST3Q8N1M1 668 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 PLD6Q8N2A8 252 aaKnown RBP18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 KIF2BQ8N4N8 673 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 GAL3ST3Q96A11 431 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 WDR34Q96EX3 536 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 QRFPRQ96P65 431 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 NPAS2Q99743 824 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 ZNF358Q9NW07 568 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 COPG2Q9UBF2 871 aa18.81■□□□□ 0.6
TRAPPC6A-203ENST00000587818 ZGRF1Q86YA3 2104 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 MYOCOSA0A1B0GUC4 107 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 POC1B-GALNT4F8VUJ3 575 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 ALDOAP04075 364 aaKnown RBP18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 RNF224P0DH78 156 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 MSH2P43246 934 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 HNRNPFP52597 415 aaKnown RBP18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 AP2B1P63010 937 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 EXT1Q16394 746 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 HIST2H2ACQ16777 129 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 ACER2Q5QJU3 275 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 HIST2H2AA3Q6FI13 130 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 H3F3CQ6NXT2 135 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 LRRC70Q7Z2Q7 622 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 RELL1Q8IUW5 271 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 RNF175Q8N4F7 328 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 TEX9Q8N6V9 391 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 TMEM52Q8NDY8 209 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 FAR1Q8WVX9 515 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 ZNF354BQ96LW1 612 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 GPR78Q96P69 363 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 TAAR6Q96RI8 345 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 FMO2Q99518 471 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 EFCAB11Q9BUY7 163 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 REXO4Q9GZR2 422 aaKnown RBP18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 EHD1Q9H4M9 534 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 CLK4Q9HAZ1 481 aaKnown RBP18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 MMP25Q9NPA2 562 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 PRDM9Q9NQV7 894 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 ANKRD10Q9NXR5 420 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 OPTCQ9UBM4 332 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 PTPN13Q12923 2485 aa18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 USP9XQ93008 2570 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC6A-203ENST00000587818 TRAV17A0A0B4J275 112 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 K7EPI3 171 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 KLHL2O95198 593 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 PCNAP12004 261 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 LAPTM5Q13571 262 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 PFKFB4Q16877 469 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 FAM83EQ2M2I3 478 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 GLE1Q53GS7 698 aaKnown RBP18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 ABHD17CQ6PCB6 329 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 QSOX2Q6ZRP7 698 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 CEP128Q6ZU80 1094 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 OR2L5Q8NG80 312 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 KIF18AQ8NI77 898 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 SLC44A1Q8WWI5 657 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 PITHD1Q9GZP4 211 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 CDCP1Q9H5V8 836 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 PRDM7Q9NQW5 492 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 CPSF2Q9P2I0 782 aaKnown RBP18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 TEKT2Q9UIF3 430 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 LRRK2Q5S007 2527 aa18.79■□□□□ 0.6
TRAPPC6A-203ENST00000587818 OR5H15A6NDH6 313 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 RTCAO00442 366 aaKnown RBP18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 B3GALT2O43825 422 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 TGFB1P01137 390 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 TUBB4AP04350 444 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 GFAPP14136 432 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 CERS1P27544 350 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 PPP2R1BP30154 601 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 CASP2P42575 452 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 SERPINB8P50452 374 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 ELOAQ14241 798 aaKnown RBP18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 ACAP2Q15057 778 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 TBCCQ15814 346 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 ADPRMQ3LIE5 342 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 PAGE2BQ5JRK9 111 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 RPUSD3Q6P087 351 aaKnown RBP18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 TRIM40Q6P9F5 258 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 UBE3DQ7Z6J8 389 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 FAM47BQ8NA70 645 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 ZNF473Q8WTR7 871 aaKnown RBP18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 PSMG3-AS1Q96PY0 264 aa18.78■□□□□ 0.6
TRAPPC6A-203ENST00000587818 FUT8Q9BYC5 575 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms