RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 UBE3DQ7Z6J8 389 aa13.28□□□□□ -0.28
GGA3-216ENST00000583282 PROSER1Q86XN7 944 aa13.28□□□□□ -0.28
GGA3-216ENST00000583282 TMEM151BQ8IW70 566 aa13.28□□□□□ -0.28
GGA3-216ENST00000583282 SPACA3Q8IXA5 215 aa13.28□□□□□ -0.28
GGA3-216ENST00000583282 LRRC8CQ8TDW0 803 aa13.28□□□□□ -0.28
GGA3-216ENST00000583282 PEX11GQ96HA9 241 aa13.28□□□□□ -0.28
GGA3-216ENST00000583282 PPP1R36Q96LQ0 422 aa13.28□□□□□ -0.28
GGA3-216ENST00000583282 KCNC2Q96PR1 638 aa13.28□□□□□ -0.28
GGA3-216ENST00000583282 SORT1Q99523 831 aa13.28□□□□□ -0.28
GGA3-216ENST00000583282 DPH2Q9BQC3 489 aaPredicted RBP13.28□□□□□ -0.28
GGA3-216ENST00000583282 SOX17Q9H6I2 414 aaPredicted RBP13.28□□□□□ -0.28
GGA3-216ENST00000583282 MANSC1Q9H8J5 431 aa13.28□□□□□ -0.28
GGA3-216ENST00000583282 IL17BQ9UHF5 180 aa13.28□□□□□ -0.28
GGA3-216ENST00000583282 TRAF6Q9Y4K3 522 aa13.28□□□□□ -0.28
GGA3-216ENST00000583282 TMEM8BA6NDV4 472 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 H0YIG0 161 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 PIP5K1BO14986 540 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 RRP8O43159 456 aaKnown RBP13.27□□□□□ -0.29
GGA3-216ENST00000583282 B3GALT2O43825 422 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 CNOT3O75175 753 aaKnown RBP13.27□□□□□ -0.29
GGA3-216ENST00000583282 DNAJB6O75190 326 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 CDC123O75794 336 aaPredicted RBP13.27□□□□□ -0.29
GGA3-216ENST00000583282 GBAP04062 536 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 CAPNS1P04632 268 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 PIM1P11309 404 aaPredicted RBP13.27□□□□□ -0.29
GGA3-216ENST00000583282 PTX3P26022 381 aaPredicted RBP13.27□□□□□ -0.29
GGA3-216ENST00000583282 EIF2S3P41091 472 aaKnown RBP13.27□□□□□ -0.29
GGA3-216ENST00000583282 XCR1P46094 333 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 MTTPP55157 894 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 FOXK2Q01167 660 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 GALNT1Q10472 559 aaPredicted RBP13.27□□□□□ -0.29
GGA3-216ENST00000583282 DEPDC1Q5TB30 811 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 NUDT13Q86X67 352 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 ZC3H7AQ8IWR0 971 aaKnown RBP13.27□□□□□ -0.29
GGA3-216ENST00000583282 EFCAB3Q8N7B9 438 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 FAM47BQ8NA70 645 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 RAB3IL1Q8TBN0 382 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 FKBP10Q96AY3 582 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 RGMAQ96B86 450 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 QRFPRQ96P65 431 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 ACTL8Q9H568 366 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 BRF2Q9HAW0 419 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 ZNF282Q9UDV7 671 aaPredicted RBP13.27□□□□□ -0.29
GGA3-216ENST00000583282 PADI2Q9Y2J8 665 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 PTRH2Q9Y3E5 179 aaKnown RBP13.27□□□□□ -0.29
GGA3-216ENST00000583282 RAP2CQ9Y3L5 183 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 MAP4K5Q9Y4K4 846 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 CCDC88CQ9P219 2028 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 APC2O95996 2303 aa13.27□□□□□ -0.29
GGA3-216ENST00000583282 C21orf140B9A014 251 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 TAF4O00268 1085 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 EEDO75530 441 aaKnown RBP13.26□□□□□ -0.29
GGA3-216ENST00000583282 JRKO75564 520 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 SEMA3DO95025 777 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 LINC00032P0C843 101 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 SMIM10L1P0DMW3 83 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 KITP10721 976 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 HSD3B1P14060 373 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 WT1P19544 449 aaPredicted RBP13.26□□□□□ -0.29
GGA3-216ENST00000583282 HIST1H1TP22492 207 aaPredicted RBP13.26□□□□□ -0.29
GGA3-216ENST00000583282 ATP5A1P25705 553 aaKnown RBP13.26□□□□□ -0.29
GGA3-216ENST00000583282 HSD3B2P26439 372 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 FOLR3P41439 243 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 RPS15P62841 145 aaKnown RBP13.26□□□□□ -0.29
GGA3-216ENST00000583282 OCA2Q04671 838 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 CUL3Q13618 768 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 NR6A1Q15406 480 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 AP5B1Q2VPB7 878 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 MINDY4Q4G0A6 757 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 VWA2Q5GFL6 755 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 SPDYAQ5MJ70 313 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 ZNF517Q6ZMY9 492 aaPredicted RBP13.26□□□□□ -0.29
GGA3-216ENST00000583282 LRRC69Q6ZNQ3 347 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 FAM47EQ6ZV65 393 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 COMMD6Q7Z4G1 85 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 CA13Q8N1Q1 262 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 ARFGAP2Q8N6H7 521 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 C1orf52Q8N6N3 182 aaKnown RBP13.26□□□□□ -0.29
GGA3-216ENST00000583282 SRFBP1Q8NEF9 429 aaKnown RBP13.26□□□□□ -0.29
GGA3-216ENST00000583282 OR51Q1Q8NH59 317 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 FAM76AQ8TAV0 307 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 STARD8Q92502 1023 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 ZNF75CPQ92670 426 aaPredicted RBP13.26□□□□□ -0.29
GGA3-216ENST00000583282 MIEF2Q96C03 454 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 SMIM10Q96HG1 83 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 CNTNAP3BQ96NU0 1288 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 SERINC2Q96SA4 455 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 CSF3RQ99062 836 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 SCN2AQ99250 2005 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 EBPLQ9BY08 206 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 ZNF717Q9BY31 904 aaPredicted RBP13.26□□□□□ -0.29
GGA3-216ENST00000583282 CNTNAP3Q9BZ76 1288 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 ILKAPQ9H0C8 392 aaPredicted RBP13.26□□□□□ -0.29
GGA3-216ENST00000583282 TUBB1Q9H4B7 451 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 PNPOQ9NVS9 261 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 GIMAP2Q9UG22 337 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 FBXW2Q9UKT8 454 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 DNAJC15Q9Y5T4 150 aa13.26□□□□□ -0.29
GGA3-216ENST00000583282 IGF2RP11717 2491 aa13.25□□□□□ -0.29
GGA3-216ENST00000583282 PSMD12O00232 456 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms