RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 SUV39H1O43463 412 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 LATO43561 262 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 TNFRSF1BP20333 461 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 CRHBPP24387 322 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 GJA4P35212 333 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 CHI3L1P36222 383 aaPredicted RBP13.1□□□□□ -0.31
SRSF1-205ENST00000582730 GSSP48637 474 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 PRIM2P49643 509 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 TMEM52BQ4KMG9 183 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 COX20Q5RI15 118 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 C6orf141Q5SZD1 244 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 EIF3MQ7L2H7 374 aaKnown RBP13.1□□□□□ -0.31
SRSF1-205ENST00000582730 CYP4Z1Q86W10 505 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 KLHDC8AQ8IYD2 350 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 SPARTQ8N0X7 666 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 MMP21Q8N119 569 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 FBXO15Q8NCQ5 510 aaPredicted RBP13.1□□□□□ -0.31
SRSF1-205ENST00000582730 C16orf78Q8WTQ4 265 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 CHFRQ96EP1 664 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 METTL2AQ96IZ6 378 aaKnown RBP13.1□□□□□ -0.31
SRSF1-205ENST00000582730 KLHL25Q9H0H3 589 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 DPEP2Q9H4A9 486 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 SFXN1Q9H9B4 322 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 TM9SF3Q9HD45 589 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 HMG20AQ9NP66 347 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 ADPRHL2Q9NX46 363 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 GPR34Q9UPC5 381 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 SNX8Q9Y5X2 465 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 ATG2BQ96BY7 2078 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 RTCAO00442 366 aaKnown RBP13.1□□□□□ -0.31
SRSF1-205ENST00000582730 TOR1BO14657 336 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 SCAMP1O15126 338 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 IL1RNP18510 177 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 ACADLP28330 430 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 OPRD1P41143 372 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 MAGEA2P43356 314 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 ALDH9A1P49189 494 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 RAPSNQ13702 412 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 RUNX3Q13761 415 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 C9orf50Q5SZB4 431 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 VITQ6UXI7 678 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 CBLL1Q75N03 491 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 ADCK2Q7Z695 626 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 C11orf96Q7Z7L8 435 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 LRRTM4Q86VH4 590 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 C11orf65Q8NCR3 313 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 PSD2Q9BQI7 771 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 OR52A5Q9H2C5 316 aa13.1□□□□□ -0.31
SRSF1-205ENST00000582730 C17orf113A0A1B0GUU1 675 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 C1orf226A1L170 272 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 SERPIND1P05546 499 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 IL3P08700 152 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 KELP23276 732 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 PPIBP23284 216 aaKnown RBP13.09□□□□□ -0.31
SRSF1-205ENST00000582730 PSMB5P28074 263 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 GSTM2P28161 218 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 CDK3Q00526 305 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 DNASE1L3Q13609 305 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 RBM48Q5RL73 367 aaKnown RBP13.09□□□□□ -0.31
SRSF1-205ENST00000582730 PNCKQ6P2M8 343 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 SLC16A12Q6ZSM3 486 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 PDZD3Q86UT5 571 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 DCUN1D3Q8IWE4 304 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 SYNPOQ8N3V7 929 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 CPA6Q8N4T0 437 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 COQ8BQ96D53 544 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 KXD1Q9BQD3 176 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 PNMA8BQ9ULN7 279 aaPredicted RBP13.09□□□□□ -0.31
SRSF1-205ENST00000582730 MAPRE3Q9UPY8 281 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 CORO2BQ9UQ03 480 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 SNX5Q9Y5X3 404 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 AXIN1O15169 862 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 XPNPEP2O43895 674 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 HTR1BP28222 390 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 DNAJA1P31689 397 aaKnown RBP13.09□□□□□ -0.31
SRSF1-205ENST00000582730 SEC13P55735 322 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 RFX4Q33E94 735 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 CYP27C1Q4G0S4 372 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 PIP5KL1Q5T9C9 394 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 C17orf64Q86WR6 236 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 LAS2Q8IYD9 372 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 KRT78Q8N1N4 520 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 PARP8Q8N3A8 854 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 HDAC2Q92769 488 aaKnown RBP13.09□□□□□ -0.31
SRSF1-205ENST00000582730 POP5Q969H6 163 aaKnown RBP13.09□□□□□ -0.31
SRSF1-205ENST00000582730 LINC00615Q96LM1 132 aaPredicted RBP13.09□□□□□ -0.31
SRSF1-205ENST00000582730 THUMPD1Q9NXG2 353 aaKnown RBP13.09□□□□□ -0.31
SRSF1-205ENST00000582730 ZNF451Q9Y4E5 1061 aa13.09□□□□□ -0.31
SRSF1-205ENST00000582730 A0A1W2PP55 124 aa13.08□□□□□ -0.31
SRSF1-205ENST00000582730 ANKDD1BA6NHY2 528 aa13.08□□□□□ -0.31
SRSF1-205ENST00000582730 FOXE1O00358 373 aaPredicted RBP13.08□□□□□ -0.31
SRSF1-205ENST00000582730 RNASET2O00584 256 aaKnown RBP13.08□□□□□ -0.31
SRSF1-205ENST00000582730 PAK4O96013 591 aaPredicted RBP13.08□□□□□ -0.31
SRSF1-205ENST00000582730 FURINP09958 794 aa13.08□□□□□ -0.31
SRSF1-205ENST00000582730 FMO3P31513 532 aa13.08□□□□□ -0.31
SRSF1-205ENST00000582730 DAPP51397 102 aa13.08□□□□□ -0.31
SRSF1-205ENST00000582730 CLCNKAP51800 687 aa13.08□□□□□ -0.31
SRSF1-205ENST00000582730 WSCD2Q2TBF2 565 aa13.08□□□□□ -0.31
SRSF1-205ENST00000582730 FAM46CQ5VWP2 391 aa13.08□□□□□ -0.31
SRSF1-205ENST00000582730 LRRC56Q8IYG6 542 aaPredicted RBP13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms