RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 NINJ2Q9NZG7 142 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 RAI14Q9P0K7 980 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 EPHA6Q9UF33 1036 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 SUN2Q9UH99 717 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 GRID1Q9ULK0 1009 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 WDR83OSQ9Y284 106 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 TUBGCP6Q96RT7 1819 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 C5P01031 1676 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 KDRP35968 1356 aa3.89□□□□□ -1.79
NF1-220ENST00000581113 C4BP0C0L5 1744 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 MAP2P11137 1827 aaKnown RBP3.88□□□□□ -1.79
NF1-220ENST00000581113 KDM6AO15550 1401 aaPredicted RBP3.88□□□□□ -1.79
NF1-220ENST00000581113 A8MXE2 369 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 SLCO1B7G3V0H7 640 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 H0YC42 278 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 AP3B1O00203 1094 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 ADCY5O95622 1261 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 CGAP01215 116 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 TOP1P11387 765 aaKnown RBP3.88□□□□□ -1.79
NF1-220ENST00000581113 CEBPBP17676 345 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 ERCC2P18074 760 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 RABIFP47224 123 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 BMXP51813 675 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 ITGA7Q13683 1181 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 PHKG1Q16816 387 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 TCP11X2Q5H9J9 407 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 SLC35D3Q5M8T2 416 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 PSRC1Q6PGN9 363 aaPredicted RBP3.88□□□□□ -1.79
NF1-220ENST00000581113 LACC1Q8IV20 430 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 MARVELD2Q8N4S9 558 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 BMPERQ8N8U9 685 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 DBF4BQ8NFT6 615 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 OR2T6Q8NHC8 308 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 DEPDC1BQ8WUY9 529 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 FAM71F1Q96KD3 344 aaPredicted RBP3.88□□□□□ -1.79
NF1-220ENST00000581113 GBP5Q96PP8 586 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 PAIP2Q9BPZ3 127 aaKnown RBP3.88□□□□□ -1.79
NF1-220ENST00000581113 CCDC3Q9BQI4 270 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 FUT8Q9BYC5 575 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 C1orf21Q9H246 121 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 ATP13A3Q9H7F0 1226 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 SUDS3Q9H7L9 328 aaPredicted RBP3.88□□□□□ -1.79
NF1-220ENST00000581113 VPS37BQ9H9H4 285 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 PLCXD1Q9NUJ7 323 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 TBC1D7Q9P0N9 293 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 C6orf203Q9P0P8 240 aaPredicted RBP3.88□□□□□ -1.79
NF1-220ENST00000581113 ACTR3BQ9P1U1 418 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 PCSK1NQ9UHG2 260 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 POMT1Q9Y6A1 747 aa3.88□□□□□ -1.79
NF1-220ENST00000581113 TRAV34A0A0B4J273 112 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 UBXN8O00124 270 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 EPHB6O15197 1021 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 AP5Z1O43299 807 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 BCAS2O75934 225 aaPredicted RBP3.87□□□□□ -1.79
NF1-220ENST00000581113 FYNP06241 537 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 MMP10P09238 476 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 RNF224P0DH78 156 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 SAGP10523 405 aaPredicted RBP3.87□□□□□ -1.79
NF1-220ENST00000581113 RFC4P35249 363 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 GP5P40197 560 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 CRKLP46109 303 aaKnown RBP3.87□□□□□ -1.79
NF1-220ENST00000581113 ATP5OP48047 213 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 SLC6A12P48065 614 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 HNMTP50135 292 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 LBX1P52954 281 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 KLC1Q07866 573 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 MTHFSDQ2M296 383 aaKnown RBP3.87□□□□□ -1.79
NF1-220ENST00000581113 HSP90B2PQ58FF3 399 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 LCN1P1Q5VSP4 162 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 OTOAQ7RTW8 1153 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 TLK2Q86UE8 772 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 TUSC5Q8IXB3 177 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 PEX5LQ8IYB4 626 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 MAML2Q8IZL2 1156 aaPredicted RBP3.87□□□□□ -1.79
NF1-220ENST00000581113 LSMEM2Q8N112 164 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 SFRP1Q8N474 314 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 CTNNBL1Q8WYA6 563 aaPredicted RBP3.87□□□□□ -1.79
NF1-220ENST00000581113 SPSB1Q96BD6 273 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 ZNF653Q96CK0 615 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 FER1L6-AS2Q96M78 137 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 SLC2A11Q9BYW1 496 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 PITPNM3Q9BZ71 974 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 MID1IP1Q9NPA3 183 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 DDX18Q9NVP1 670 aaKnown RBP3.87□□□□□ -1.79
NF1-220ENST00000581113 OR6C2Q9NZP2 312 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 KLHL8Q9P2G9 620 aaPredicted RBP3.87□□□□□ -1.79
NF1-220ENST00000581113 PTBP2Q9UKA9 531 aaKnown RBP3.87□□□□□ -1.79
NF1-220ENST00000581113 WDR37Q9Y2I8 494 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 N6AMT1Q9Y5N5 214 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 NPC1L1Q9UHC9 1359 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 ITGB4P16144 1822 aa3.87□□□□□ -1.79
NF1-220ENST00000581113 TAF1LQ8IZX4 1826 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 ARPC4-TTLL3A0A0A6YYG9 625 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 MSGN1A6NI15 193 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 ZNF195O14628 629 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 CASQ2O14958 399 aaPredicted RBP3.86□□□□□ -1.79
NF1-220ENST00000581113 RTN2O75298 545 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 OLFM2O95897 454 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 CSN3P07498 182 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 CCNA1P78396 465 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms