RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 C4orf51C9J302 202 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 SCAMP2O15127 329 aaKnown RBP13.01□□□□□ -0.33
CCDC40-209ENST00000573474 GSC2O15499 205 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 GUCY1B2O75343 617 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 SCELO95171 688 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 CPNE6O95741 557 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 PGRP06401 933 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 ZNF888P0CJ79 500 aaPredicted RBP13.01□□□□□ -0.33
CCDC40-209ENST00000573474 COX7A2P14406 83 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 CKMT2P17540 419 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 ZNF10P21506 573 aaPredicted RBP13.01□□□□□ -0.33
CCDC40-209ENST00000573474 HIST1H1TP22492 207 aaPredicted RBP13.01□□□□□ -0.33
CCDC40-209ENST00000573474 GABRA4P48169 554 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 BTN3A2P78410 334 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 SLC9A5Q14940 896 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 UGT8Q16880 541 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 PGS1Q32NB8 556 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 SPANXN4Q5MJ08 99 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 SNAP47Q5SQN1 464 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 WASHC2DQ5SRD0 308 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 CPTPQ5TA50 214 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 TMEM214Q6NUQ4 689 aaKnown RBP13.01□□□□□ -0.33
CCDC40-209ENST00000573474 ZNF793Q6ZN11 406 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 RIPOR1Q6ZS17 1223 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 MSANTD1Q6ZTZ1 278 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 CAMKMTQ7Z624 323 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 RETREG3Q86VR2 466 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 DPP10Q8N608 796 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 ACOT4Q8N9L9 421 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 OR4D9Q8NGE8 314 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 OR8K5Q8NH50 307 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 RHBDD1Q8TEB9 315 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 KLHL6Q8WZ60 621 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 ATOH1Q92858 354 aaPredicted RBP13.01□□□□□ -0.33
CCDC40-209ENST00000573474 ROPN1LQ96C74 230 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 TM4SF18Q96CE8 201 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 MTERF3Q96E29 417 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 SLC41A2Q96JW4 573 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 ZNF285Q96NJ3 590 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 NUDT22Q9BRQ3 303 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 CADM1Q9BY67 442 aaKnown RBP13.01□□□□□ -0.33
CCDC40-209ENST00000573474 COPS7BQ9H9Q2 264 aaPredicted RBP13.01□□□□□ -0.33
CCDC40-209ENST00000573474 TMEM9Q9P0T7 183 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 MAP10Q9P2G4 905 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 PDP2Q9P2J9 529 aa13.01□□□□□ -0.33
CCDC40-209ENST00000573474 GOLGA4Q13439 2230 aaKnown RBP13□□□□□ -0.33
CCDC40-209ENST00000573474 A0A1W2PQM1 296 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 ASPDHA6ND91 283 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 GABRR3A8MPY1 467 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 CDX4O14627 284 aaPredicted RBP13□□□□□ -0.33
CCDC40-209ENST00000573474 HCRTR1O43613 425 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 TMPRSS11DO60235 418 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 LRP3O75074 770 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 NPPAP01160 153 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 IL3P08700 152 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 FAM58BPP0C7Q3 252 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 NQO1P15559 274 aaKnown RBP13□□□□□ -0.33
CCDC40-209ENST00000573474 DDX5P17844 614 aaKnown RBP13□□□□□ -0.33
CCDC40-209ENST00000573474 ALOX12P18054 663 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 KIR3DL1P43629 444 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 SEPHS1P49903 392 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 MTTPP55157 894 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 KLC1Q07866 573 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 SPEM2Q0P670 501 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 SLAMF1Q13291 335 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 HEPACAMQ14CZ8 416 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 CSRP2Q16527 193 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 PRTGQ2VWP7 1150 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 DEFB110Q30KQ9 67 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 TCTE1Q5JU00 501 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 TMTC4Q5T4D3 741 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 MRM1Q6IN84 353 aaKnown RBP13□□□□□ -0.33
CCDC40-209ENST00000573474 DEFB107AQ8IZN7 70 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 PGAM4Q8N0Y7 254 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 ARHGAP24Q8N264 748 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 D2HGDHQ8N465 521 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 AMER3Q8N944 861 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 OR7A2PQ8NGA2 310 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 OR8J2Q8NGG1 315 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 ZCCHC10Q8TBK6 192 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 N4BP2L2Q92802 583 aaPredicted RBP13□□□□□ -0.33
CCDC40-209ENST00000573474 MCUR1Q96AQ8 359 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 COQ8BQ96D53 544 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 RAB3IPQ96QF0 476 aaPredicted RBP13□□□□□ -0.33
CCDC40-209ENST00000573474 OR52E6Q96RD3 313 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 SERINC2Q96SA4 455 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 MMADHCQ9H3L0 296 aaPredicted RBP13□□□□□ -0.33
CCDC40-209ENST00000573474 ZNF768Q9H5H4 540 aaKnown RBP13□□□□□ -0.33
CCDC40-209ENST00000573474 RMND5AQ9H871 391 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 WDR41Q9HAD4 459 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 TMEM9BQ9NQ34 198 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 SEMA4GQ9NTN9 838 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 LYARQ9NX58 379 aaKnown RBP13□□□□□ -0.33
CCDC40-209ENST00000573474 FTSJ1Q9UET6 329 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 CROTQ9UKG9 612 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 ATXN7L1Q9ULK2 861 aaPredicted RBP13□□□□□ -0.33
CCDC40-209ENST00000573474 EXO1Q9UQ84 846 aaKnown RBP13□□□□□ -0.33
CCDC40-209ENST00000573474 SLC22A7Q9Y694 548 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 USP34Q70CQ2 3546 aa13□□□□□ -0.33
CCDC40-209ENST00000573474 A8MU76 341 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms