RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 ZNF860A6NHJ4 632 aa11.81□□□□□ -0.52
KARS-204ENST00000564578 JUNP05412 331 aaKnown RBP11.81□□□□□ -0.52
KARS-204ENST00000564578 CCNYL3P0C7X3 344 aa11.81□□□□□ -0.52
KARS-204ENST00000564578 MAT1AQ00266 395 aaKnown RBP11.81□□□□□ -0.52
KARS-204ENST00000564578 HMGCS1Q01581 520 aa11.81□□□□□ -0.52
KARS-204ENST00000564578 SRSF6Q13247 344 aaKnown RBP11.81□□□□□ -0.52
KARS-204ENST00000564578 DSG2Q14126 1118 aa11.81□□□□□ -0.52
KARS-204ENST00000564578 MRPL14Q6P1L8 145 aaKnown RBP11.81□□□□□ -0.52
KARS-204ENST00000564578 CKAP2Q8WWK9 683 aa11.81□□□□□ -0.52
KARS-204ENST00000564578 C11orf24Q96F05 449 aaPredicted RBP11.81□□□□□ -0.52
KARS-204ENST00000564578 NAF1Q96HR8 494 aaKnown RBP11.81□□□□□ -0.52
KARS-204ENST00000564578 KCNC2Q96PR1 638 aa11.81□□□□□ -0.52
KARS-204ENST00000564578 ILKAPQ9H0C8 392 aaPredicted RBP11.81□□□□□ -0.52
KARS-204ENST00000564578 SLCO1B3Q9NPD5 702 aa11.81□□□□□ -0.52
KARS-204ENST00000564578 SLC12A4Q9UP95 1085 aa11.81□□□□□ -0.52
KARS-204ENST00000564578 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.81□□□□□ -0.52
KARS-204ENST00000564578 SSUH2Q9Y2M2 353 aa11.81□□□□□ -0.52
KARS-204ENST00000564578 RDH16O75452 317 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 CRCPO75575 148 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 KLF7O75840 302 aaPredicted RBP11.8□□□□□ -0.52
KARS-204ENST00000564578 SNUPNO95149 360 aaKnown RBP11.8□□□□□ -0.52
KARS-204ENST00000564578 HSD3B1P14060 373 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 TCN2P20062 427 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 HSD3B2P26439 372 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 BSGP35613 385 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 EIF2S3P41091 472 aaKnown RBP11.8□□□□□ -0.52
KARS-204ENST00000564578 PHEXP78562 749 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 CSTF3Q12996 717 aaKnown RBP11.8□□□□□ -0.52
KARS-204ENST00000564578 RUNX2Q13950 521 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 FAM69BQ5VUD6 431 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 ATG16L1Q676U5 607 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 OR4C11Q6IEV9 310 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 TRIM40Q6P9F5 258 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 RNF165Q6ZSG1 346 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 Q6ZSR9 355 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 OVCH1Q7RTY7 1134 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 TRIM42Q8IWZ5 723 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 GBP7Q8N8V2 638 aaPredicted RBP11.8□□□□□ -0.52
KARS-204ENST00000564578 ZNF248Q8NDW4 579 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 OR2T11Q8NH01 316 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 CT55Q8WUE5 264 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 TWIST2Q8WVJ9 160 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 SERPINI1Q99574 410 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 PNPOQ9NVS9 261 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 VPS29Q9UBQ0 182 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 CTSFQ9UBX1 484 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 CROTQ9UKG9 612 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 CDC14AQ9UNH5 594 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 MAP1BP46821 2468 aaKnown RBP11.8□□□□□ -0.52
KARS-204ENST00000564578 IGLV3-12A0A075B6K2 115 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 EEDO75530 441 aaKnown RBP11.8□□□□□ -0.52
KARS-204ENST00000564578 SEMA3DO95025 777 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 SCELO95171 688 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 AGXTP21549 392 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 HIST1H1TP22492 207 aaPredicted RBP11.8□□□□□ -0.52
KARS-204ENST00000564578 ATP5A1P25705 553 aaKnown RBP11.8□□□□□ -0.52
KARS-204ENST00000564578 AVPR1BP47901 424 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 RPL14P50914 215 aaKnown RBP11.8□□□□□ -0.52
KARS-204ENST00000564578 ARFIP1P53367 373 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 OLR1P78380 273 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 FOXK2Q01167 660 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 PROSER1Q86XN7 944 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 IL22RA1Q8N6P7 574 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 ACOT4Q8N9L9 421 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 SRFBP1Q8NEF9 429 aaKnown RBP11.8□□□□□ -0.52
KARS-204ENST00000564578 COL26A1Q96A83 441 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 RGMAQ96B86 450 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 C3orf30Q96M34 536 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 TBCDQ9BTW9 1192 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 SLC26A1Q9H2B4 701 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 DDX31Q9H8H2 851 aaKnown RBP11.8□□□□□ -0.52
KARS-204ENST00000564578 IFT80Q9P2H3 777 aaPredicted RBP11.8□□□□□ -0.52
KARS-204ENST00000564578 MAP4K5Q9Y4K4 846 aa11.8□□□□□ -0.52
KARS-204ENST00000564578 PIP5K1BO14986 540 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 EFSO43281 561 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 ALBP02768 609 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 GBAP04062 536 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 LINC00032P0C843 101 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 WT1P19544 449 aaPredicted RBP11.79□□□□□ -0.52
KARS-204ENST00000564578 CERS1P27544 350 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 TSFMP43897 325 aaKnown RBP11.79□□□□□ -0.52
KARS-204ENST00000564578 EFNA3P52797 238 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 KIAA0040Q15053 153 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 NCF4Q15080 339 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 NKG7Q16617 165 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 VWA2Q5GFL6 755 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 ARHGAP40Q5TG30 622 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 MLIPQ5VWP3 458 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 RGS9BPQ6ZS82 235 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 VASH2Q86V25 355 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 LAPTM4BQ86VI4 370 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 METTL4Q8N3J2 472 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 ARFGAP2Q8N6H7 521 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 OR51Q1Q8NH59 317 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 LRRC8CQ8TDW0 803 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 CHTF18Q8WVB6 975 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 DYDC1Q8WWB3 177 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 APIPQ96GX9 242 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 FAR2Q96K12 515 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 MAGEB18Q96M61 343 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms