RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 DPEP3Q9H4B8 488 aa4.93□□□□□ -1.62
VPS35P1-201ENST00000563400 AZI2Q9H6S1 392 aa4.93□□□□□ -1.62
VPS35P1-201ENST00000563400 WDR76Q9H967 626 aa4.93□□□□□ -1.62
VPS35P1-201ENST00000563400 MMP25Q9NPA2 562 aa4.93□□□□□ -1.62
VPS35P1-201ENST00000563400 COPS7AQ9UBW8 275 aa4.93□□□□□ -1.62
VPS35P1-201ENST00000563400 ATG4BQ9Y4P1 393 aa4.93□□□□□ -1.62
VPS35P1-201ENST00000563400 KCTD3Q9Y597 815 aa4.93□□□□□ -1.62
VPS35P1-201ENST00000563400 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.93□□□□□ -1.62
VPS35P1-201ENST00000563400 COL4A1P02462 1669 aa4.93□□□□□ -1.62
VPS35P1-201ENST00000563400 NAV1Q8NEY1 1877 aa4.93□□□□□ -1.62
VPS35P1-201ENST00000563400 A0A087X0K7 114 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 A0A0U1RQF3 1178 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 KANSL1LA0AUZ9 987 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 GOLGA6L4A6NEF3 574 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 TMEM221A6NGB7 291 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 ANKRD30BLA7E2S9 258 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 A8MUI8 341 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 BECN2A8MW95 431 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 AHRRA9YTQ3 701 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 LEFTY2O00292 366 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 KCNAB3O43448 404 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 TMPRSS11DO60235 418 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 DFNA5O60443 496 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 LRP3O75074 770 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 TM7SF2O76062 418 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 MT-ND1P03886 318 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 CRYGCP07315 174 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 CSN3P07498 182 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 CHRNGP07510 517 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 NUDT17P0C025 328 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 GOLGA8HP0CJ92 632 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 B4GALT1P15291 398 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 CYP2B6P20813 491 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 S1PR1P21453 382 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 PTGER1P34995 402 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 HTR2BP41595 481 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 IER3P46695 156 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 LEPRP48357 1165 aaKnown RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 LHX1P48742 406 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 ZNF84P51523 738 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 NUDT6P53370 316 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 MAPK12P53778 367 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 SUMO2P61956 95 aaKnown RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 RPS7P62081 194 aaKnown RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 CSNK2BP67870 215 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 IRX4P78413 519 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 DLK1P80370 383 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 CDK3Q00526 305 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 CFHR1Q03591 330 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 NCBP1Q09161 790 aaKnown RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 MELKQ14680 651 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 NONOQ15233 471 aaKnown RBP eCLIP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 TPD52L1Q16890 204 aaPredicted RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 RNF151Q2KHN1 245 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 QRICH1Q2TAL8 776 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 HSP90AA4PQ58FG1 418 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 CARD17Q5XLA6 110 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 ERICH5Q6P6B1 374 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 PQLC2Q6ZP29 291 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 NIPA1Q7RTP0 329 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 IRF2BP2Q7Z5L9 587 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 TPRA1Q86W33 373 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 ZDHHC17Q8IUH5 632 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 KATNAL2Q8IYT4 538 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 OR9K2Q8NGE7 335 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 OR52N2Q8NGI0 321 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 MZB1Q8WU39 189 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 FAR1Q8WVX9 515 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 ATL1Q8WXF7 558 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 ZBTB8AQ96BR9 441 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 HMCESQ96FZ2 354 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 GLT1D1Q96MS3 346 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 SFXN2Q96NB2 322 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 SLITRK1Q96PX8 696 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 TEFMQ96QE5 360 aaKnown RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 LMF1Q96S06 567 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 RAB40CQ96S21 281 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 RASL10BQ96S79 203 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 NPAS2Q99743 824 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 TRMOQ9BU70 441 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 TRIM62Q9BVG3 475 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 ZMYND12Q9H0C1 365 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 FOXP1Q9H334 677 aaPredicted RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 SNX25Q9H3E2 840 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 SPATA7Q9P0W8 599 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 PACSIN2Q9UNF0 486 aaPredicted RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 FZD1Q9UP38 647 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 B3GALT5Q9Y2C3 310 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 A3GALT2U3KPV4 340 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 DOCK1Q14185 1865 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 MYH8P13535 1937 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 FOCADQ5VW36 1801 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 KAT6AQ92794 2004 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 TMEM129A0AVI4 362 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 ILVBLA1L0T0 632 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 FAM149AA5PLN7 773 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 KLF11O14901 512 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 FOXN1O15353 648 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms