RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 RASSF5Q8WWW0 418 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 OTUB2Q96DC9 234 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 DHDHQ9UQ10 334 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PUS1Q9Y606 427 aaKnown RBP eCLIP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 KCPQ6ZWJ8 1503 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 RPTORQ8N122 1335 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SPATA31C2B4DYI2 1134 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 USP2O75604 605 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 CNIH1O95406 144 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 C7P10643 843 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SELPP16109 830 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 F2RP25116 425 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SLC6A11P48066 632 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 FOLH1Q04609 750 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 NKPD1Q17RQ9 610 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 VWA5B1Q5TIE3 1220 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 LRRC66Q68CR7 880 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF398Q8TD17 642 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 STK32AQ8WU08 396 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PCDH18Q9HCL0 1135 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 EMC3Q9P0I2 261 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 UXTQ9UBK9 157 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 DRG1Q9Y295 367 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ERI3O43414 337 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PRAMEF12O95522 483 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 F3P13726 295 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 HGFP14210 728 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 IFNGR2P38484 337 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 LSSP48449 732 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PRMT2P55345 433 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 KCNT2Q6UVM3 1135 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 FAM35AQ86V20 835 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SPPL2CQ8IUH8 684 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF687Q8N1G0 1237 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 WDR20Q8TBZ3 569 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ZHX1-C8orf76Q96EF9 292 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 DIRAS2Q96HU8 199 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ANKRD60Q9BZ19 345 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 CRTAC1Q9NQ79 661 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 GDF3Q9NR23 364 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 RSL24D1Q9UHA3 163 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 DUOX2Q9NRD8 1548 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 FER1L4A9Z1Z3 1794 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ADGRL2O95490 1459 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SAMD9LQ8IVG5 1584 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 RTCAO00442 366 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 WNT10BO00744 389 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 CBX7O95931 251 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ETV4P43268 484 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 FAM189BP81408 668 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ZFP69Q49AA0 526 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TPRG1Q6ZUI0 275 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MOB3CQ70IA8 216 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 OSTM1Q86WC4 334 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF713Q8N859 430 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 NDNFQ8TB73 568 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 BPIFA2Q96DR5 249 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 OXNAD1Q96HP4 312 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 EAF1Q96JC9 268 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 LURAP1Q96LR2 239 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PABPC3Q9H361 631 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SEC14L3Q9UDX4 400 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 RABL2BQ9UNT1 228 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 CFL2Q9Y281 166 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 CLCA3PQ9Y6N3 262 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 FAM237BA0A1B0GVD1 139 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 A0A1W2PR80 420 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 OR6C74A6NCV1 312 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 OR14I1A6ND48 311 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 YIF1AO95070 293 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 GDF1P27539 372 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 DEFB103AP81534 67 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PIGFQ07326 219 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PDK3Q15120 406 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 TOP6BLQ8N6T0 577 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 SERINC2Q96SA4 455 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 MRPS30Q9NP92 439 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 PRELID1Q9Y255 219 aa3.2□□□□□ -1.9
SYNE2-212ENST00000554584 DNMT1P26358 1616 aaKnown RBP3.2□□□□□ -1.9
SYNE2-212ENST00000554584 EFSO43281 561 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF780AO75290 641 aaPredicted RBP3.19□□□□□ -1.9
SYNE2-212ENST00000554584 RPS3AP61247 264 aaKnown RBP3.19□□□□□ -1.9
SYNE2-212ENST00000554584 GAD2Q05329 585 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 CDH17Q12864 832 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 GINS1Q14691 196 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 NECTIN1Q15223 517 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 SLC5A9Q2M3M2 681 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 LYSMD3Q7Z3D4 306 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 DENND2DQ9H6A0 471 aaPredicted RBP3.19□□□□□ -1.9
SYNE2-212ENST00000554584 AAR2Q9Y312 384 aaKnown RBP3.19□□□□□ -1.9
SYNE2-212ENST00000554584 PTRH2Q9Y3E5 179 aaKnown RBP3.19□□□□□ -1.9
SYNE2-212ENST00000554584 PLEKHM1Q9Y4G2 1056 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 KIAA0556O60303 1618 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 CRB1P82279 1406 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 NPIPA2E9PIF3 369 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 NPIPA3F8WFD2 350 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 SPAG6O75602 509 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 PSMG1O95456 288 aa3.19□□□□□ -1.9
SYNE2-212ENST00000554584 SEMG1P04279 462 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms