RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 COMMD3Q9UBI1 195 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 AFF4Q9UHB7 1163 aaKnown RBP11.75□□□□□ -0.53
ERBB3-219ENST00000551242 SMIM35A0A1B0GVV1 85 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 A8MX80 341 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 TSPAN4O14817 238 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 FABP7O15540 132 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 TPST2O60704 377 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 STK16O75716 305 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 SLC25A14O95258 325 aaPredicted RBP11.75□□□□□ -0.53
ERBB3-219ENST00000551242 PRAMEF12O95522 483 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 IGFBP1P08833 259 aaPredicted RBP11.75□□□□□ -0.53
ERBB3-219ENST00000551242 ODC1P11926 461 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 COX7A2P14406 83 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 CD9P21926 228 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 CCDC85BQ15834 202 aaPredicted RBP11.75□□□□□ -0.53
ERBB3-219ENST00000551242 TMEM65Q6PI78 240 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 ANKS3Q6ZW76 656 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 KCTD20Q7Z5Y7 419 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 SPATA2LQ8IUW3 424 aaPredicted RBP11.75□□□□□ -0.53
ERBB3-219ENST00000551242 PHC2Q8IXK0 858 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 NAGSQ8N159 534 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 SLC37A3Q8NCC5 494 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 GALNT6Q8NCL4 622 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 PIH1D2Q8WWB5 315 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 TMEM80Q96HE8 168 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 TMEM245Q9H330 911 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 PDFQ9HBH1 243 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 RBFOX1Q9NWB1 397 aaKnown RBP11.75□□□□□ -0.53
ERBB3-219ENST00000551242 TMCC3Q9ULS5 477 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 PRSS21Q9Y6M0 314 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 PIKFYVEQ9Y2I7 2098 aa11.75□□□□□ -0.53
ERBB3-219ENST00000551242 IGLV3-10A0A075B6K4 115 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 SH3BGRLO75368 114 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 POMCP01189 267 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 ETV3P41162 512 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 VEZF1Q14119 521 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 UPP1Q16831 310 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 NOXRED1Q6NXP6 359 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 ANKRD54Q6NXT1 300 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 CDH24Q86UP0 819 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 PDZD3Q86UT5 571 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 SYT12Q8IV01 421 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 AQP11Q8NBQ7 271 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 TOR1AIP2Q8NFQ8 470 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 PHF21AQ96BD5 680 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 MSLNLQ96KJ4 702 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 CINPQ9BW66 212 aaPredicted RBP11.74□□□□□ -0.53
ERBB3-219ENST00000551242 SNX11Q9Y5W9 270 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 ARL5CA6NH57 179 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 INSIG1O15503 277 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 DPM1O60762 260 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 ARHGEF15O94989 841 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 SOX14O95416 240 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 ITGB7P26010 798 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 HOXD9P28356 352 aaPredicted RBP11.74□□□□□ -0.53
ERBB3-219ENST00000551242 PER3P56645 1201 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 SELENOWP63302 87 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 CDC42EP1Q00587 391 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 RHAGQ02094 409 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 MFSD13AQ14CX5 517 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 PCBP1Q15365 356 aaKnown RBP eCLIP11.74□□□□□ -0.539e-31■■□□□ 12.4
ERBB3-219ENST00000551242 GPR155Q7Z3F1 870 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 METTL23Q86XA0 190 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 ZNF680Q8NEM1 530 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 DNAJA4Q8WW22 397 aaPredicted RBP11.74□□□□□ -0.53
ERBB3-219ENST00000551242 TCF25Q9BQ70 676 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 MGME1Q9BQP7 344 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 MCOLN1Q9GZU1 580 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 RACGAP1Q9H0H5 632 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 NDUFB11Q9NX14 153 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 ZNF224Q9NZL3 707 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 RWDD3Q9Y3V2 267 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 PATJQ8NI35 1801 aa11.74□□□□□ -0.53
ERBB3-219ENST00000551242 ANKRD66B4E2M5 251 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 ATP6V1G2-DDX39BF2Z307 99 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 LYRM1O43325 122 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 SNAI1O95863 264 aaPredicted RBP11.73□□□□□ -0.53
ERBB3-219ENST00000551242 GASTP01350 101 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 GLULP15104 373 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 CTPS1P17812 591 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 DDCP20711 480 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 TEKQ02763 1124 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 MTAPQ13126 283 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 GAB1Q13480 694 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 MPPE1Q53F39 396 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 TEX261Q6UWH6 196 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 FAM151BQ6UXP7 276 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 TMEM145Q8NBT3 493 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 GALNT11Q8NCW6 608 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 U3KQ87 197 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 PTPRDP23468 1912 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 CCDC88CQ9P219 2028 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 SH3D21A4FU49 640 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 LINC00862A6NCI5 91 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 PSIP1O75475 530 aaKnown RBP11.73□□□□□ -0.53
ERBB3-219ENST00000551242 FAM157BP0CG42 384 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 ZNF865P0CJ78 1059 aaPredicted RBP11.73□□□□□ -0.53
ERBB3-219ENST00000551242 RGS4P49798 205 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 ABATP80404 500 aa11.73□□□□□ -0.53
ERBB3-219ENST00000551242 C9orf131Q5VYM1 1079 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms