RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 TBC1D19Q8N5T2 526 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 MDS2Q8NDY4 140 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 M1APQ8TC57 530 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 ELP5Q8TE02 316 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 UBTD2Q8WUN7 234 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 GAL3ST3Q96A11 431 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 GPR78Q96P69 363 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 SIGLEC12Q96PQ1 595 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 FUT8Q9BYC5 575 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 HES7Q9BYE0 225 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 CACNA1DQ01668 2161 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 CENPEQ02224 2701 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 TRAV17A0A0B4J275 112 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 DYTNA2CJ06 578 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 LRRC14BA6NHZ5 514 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 ERI3O43414 337 aaKnown RBP12.21□□□□□ -0.45
NPAS3-209ENST00000551008 KERAO60938 352 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 CLEC3AO75596 197 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 ALDOAP04075 364 aaKnown RBP12.21□□□□□ -0.45
NPAS3-209ENST00000551008 RNH1P13489 461 aaKnown RBP12.21□□□□□ -0.45
NPAS3-209ENST00000551008 ICAM2P13598 275 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 MST1P26927 711 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 PPP2R1BP30154 601 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 OR4D2P58180 307 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 BTN3A2P78410 334 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 PMP22Q01453 160 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 PCDH1Q08174 1060 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 EXT1Q16394 746 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 PDK4Q16654 411 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 WHAMMP3Q1A5X7 153 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 ACER2Q5QJU3 275 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 ZNF468Q5VIY5 522 aaPredicted RBP12.21□□□□□ -0.45
NPAS3-209ENST00000551008 ABHD17BQ5VST6 288 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 CRYBG3Q68DQ2 2970 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 ZNF793Q6ZN11 406 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 RELL1Q8IUW5 271 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 MRRFQ96E11 262 aaKnown RBP12.21□□□□□ -0.45
NPAS3-209ENST00000551008 PTCHD1Q96NR3 888 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 CSF3RQ99062 836 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 LPAR4Q99677 370 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 CD244Q9BZW8 370 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 RHBGQ9H310 441 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 CLK4Q9HAZ1 481 aaKnown RBP12.21□□□□□ -0.45
NPAS3-209ENST00000551008 SNX15Q9NRS6 342 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 NUDT4Q9NZJ9 180 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 CD274Q9NZQ7 290 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 ZNF223Q9UK11 482 aaPredicted RBP12.21□□□□□ -0.45
NPAS3-209ENST00000551008 RNF112Q9ULX5 631 aa12.21□□□□□ -0.45
NPAS3-209ENST00000551008 NCOA6Q14686 2063 aaPredicted RBP12.21□□□□□ -0.45
NPAS3-209ENST00000551008 ITPR2Q14571 2701 aa12.21□□□□□ -0.46
NPAS3-209ENST00000551008 SAGE2PA6NJ88 616 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 A8MUI8 341 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 PRMT3O60678 531 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 CLDN1O95832 211 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 C2P06681 752 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 LTA4HP09960 611 aaKnown RBP12.2□□□□□ -0.46
NPAS3-209ENST00000551008 EDN3P14138 238 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 JAK1P23458 1154 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 CERS1P27544 350 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 CRABP2P29373 138 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 CASP2P42575 452 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 MAGEA12P43365 314 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 TUBA3CQ13748 450 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 TBCCQ15814 346 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 XKR6Q5GH73 641 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 MROH9Q5TGP6 573 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 NIPAL1Q6NVV3 410 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 ABHD17CQ6PCB6 329 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 TUBA3EQ6PEY2 450 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 LRRC70Q7Z2Q7 622 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 PLD6Q8N2A8 252 aaKnown RBP12.2□□□□□ -0.46
NPAS3-209ENST00000551008 RNF175Q8N4F7 328 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 SNX31Q8N9S9 440 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 APCDD1LQ8NCL9 501 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 OR2L5Q8NG80 312 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 NR4A3Q92570 626 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 PTCD3Q96EY7 689 aaKnown RBP12.2□□□□□ -0.46
NPAS3-209ENST00000551008 F2RL3Q96RI0 385 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 MS4A8Q9BY19 250 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 PITHD1Q9GZP4 211 aaPredicted RBP12.2□□□□□ -0.46
NPAS3-209ENST00000551008 CDC42EP4Q9H3Q1 356 aaKnown RBP12.2□□□□□ -0.46
NPAS3-209ENST00000551008 ACSS3Q9H6R3 686 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 CNOT10Q9H9A5 744 aaKnown RBP12.2□□□□□ -0.46
NPAS3-209ENST00000551008 KCNK13Q9HB14 408 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 NMRAL1Q9HBL8 299 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 PRDM9Q9NQV7 894 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 PRDM7Q9NQW5 492 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 AGPAT4Q9NRZ5 378 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 STMN3Q9NZ72 180 aa12.2□□□□□ -0.46
NPAS3-209ENST00000551008 PLEKHB1Q9UF11 243 aaPredicted RBP12.2□□□□□ -0.46
NPAS3-209ENST00000551008 URADA6NGE7 173 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 CYR61O00622 381 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 KLK8O60259 260 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 CCNT2O60583 730 aaKnown RBP12.19□□□□□ -0.46
NPAS3-209ENST00000551008 PRAMEF2O60811 474 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 H2AFYO75367 372 aaKnown RBP12.19□□□□□ -0.46
NPAS3-209ENST00000551008 NEURL1O76050 574 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 GSTM2P28161 218 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 CD96P40200 585 aa12.19□□□□□ -0.46
NPAS3-209ENST00000551008 GPR143P51810 404 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms