RNA–Protein interactions for RNA: ENST00000550236.1

ATXN2-220, Transcript of ataxin 2, humanhuman

TSL 5

Gene ATXN2, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-220ENST00000550236 TBC1D20Q96BZ9 403 aa7.85□□□□□ -1.15
ATXN2-220ENST00000550236 MTFMTQ96DP5 389 aaKnown RBP7.85□□□□□ -1.15
ATXN2-220ENST00000550236 MS4A6EQ96DS6 147 aa7.85□□□□□ -1.15
ATXN2-220ENST00000550236 SMIM10Q96HG1 83 aa7.85□□□□□ -1.15
ATXN2-220ENST00000550236 FAR2Q96K12 515 aa7.85□□□□□ -1.15
ATXN2-220ENST00000550236 ATOH8Q96SQ7 321 aa7.85□□□□□ -1.15
ATXN2-220ENST00000550236 SORBS1Q9BX66 1292 aaKnown RBP7.85□□□□□ -1.15
ATXN2-220ENST00000550236 KRTAP3-3Q9BYR6 98 aa7.85□□□□□ -1.15
ATXN2-220ENST00000550236 KRTAP3-2Q9BYR7 98 aa7.85□□□□□ -1.15
ATXN2-220ENST00000550236 CNOT10Q9H9A5 744 aaKnown RBP7.85□□□□□ -1.15
ATXN2-220ENST00000550236 PNO1Q9NRX1 252 aaKnown RBP7.85□□□□□ -1.15
ATXN2-220ENST00000550236 RIC8BQ9NVN3 520 aa7.85□□□□□ -1.15
ATXN2-220ENST00000550236 STMN3Q9NZ72 180 aa7.85□□□□□ -1.15
ATXN2-220ENST00000550236 OPTCQ9UBM4 332 aa7.85□□□□□ -1.15
ATXN2-220ENST00000550236 ANGPTL3Q9Y5C1 460 aa7.85□□□□□ -1.15
ATXN2-220ENST00000550236 A0A087X1B8 175 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 DYTNA2CJ06 578 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 BLACEA4D250 179 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 LRIT2A6NDA9 550 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 URADA6NGE7 173 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 FOXO6A8MYZ6 492 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 TRIM49D1C9J1S8 452 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 K7EPI3 171 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 PSMD12O00232 456 aaPredicted RBP7.84□□□□□ -1.15
ATXN2-220ENST00000550236 KLHL41O60662 606 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 PRMT3O60678 531 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 KERAO60938 352 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 SEMA7AO75326 666 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 AGFG2O95081 481 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 TBX6O95947 436 aaPredicted RBP7.84□□□□□ -1.15
ATXN2-220ENST00000550236 ALDOAP04075 364 aaKnown RBP7.84□□□□□ -1.15
ATXN2-220ENST00000550236 SERPINA6P08185 405 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 RNH1P13489 461 aaKnown RBP7.84□□□□□ -1.15
ATXN2-220ENST00000550236 MTHFD2P13995 350 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 TSPAN8P19075 237 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 CERS1P27544 350 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 GGT5P36269 586 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 STXBP1P61764 594 aaKnown RBP7.84□□□□□ -1.15
ATXN2-220ENST00000550236 PMP22Q01453 160 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 ID2Q02363 134 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 NAB1Q13506 487 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 HIST2H2ACQ16777 129 aaPredicted RBP7.84□□□□□ -1.15
ATXN2-220ENST00000550236 CRB2Q5IJ48 1285 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 TEX35Q5T0J7 233 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 ABHD17BQ5VST6 288 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 HIST2H2AA3Q6FI13 130 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 RPS27LQ71UM5 84 aaKnown RBP7.84□□□□□ -1.15
ATXN2-220ENST00000550236 CRLF3Q8IUI8 442 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 BEST3Q8N1M1 668 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 CEP112Q8N8E3 955 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 PDPRQ8NCN5 879 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 GALNT11Q8NCW6 608 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 THAP3Q8WTV1 239 aaPredicted RBP7.84□□□□□ -1.15
ATXN2-220ENST00000550236 PHF21BQ96EK2 531 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 PTCD3Q96EY7 689 aaKnown RBP7.84□□□□□ -1.15
ATXN2-220ENST00000550236 CDK15Q96Q40 435 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 LMF1Q96S06 567 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 PAFAH2Q99487 392 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 TUBB6Q9BUF5 446 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 SARGQ9BW04 601 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 HES7Q9BYE0 225 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 FAM129AQ9BZQ8 928 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 PHACTR1Q9C0D0 580 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 OR51B5Q9H339 312 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 CDCP1Q9H5V8 836 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 ACSS3Q9H6R3 686 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 LIN28AQ9H9Z2 209 aaKnown RBP7.84□□□□□ -1.15
ATXN2-220ENST00000550236 KLHL1Q9NR64 748 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 NUDT4Q9NZJ9 180 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 C19orf25Q9UFG5 118 aaPredicted RBP7.84□□□□□ -1.15
ATXN2-220ENST00000550236 IKBKGQ9Y6K9 419 aa7.84□□□□□ -1.15
ATXN2-220ENST00000550236 CROCCQ5TZA2 2017 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 SPENQ96T58 3664 aaKnown RBP7.83□□□□□ -1.16
ATXN2-220ENST00000550236 ARHGAP10A1A4S6 786 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 MAGEB17A8MXT2 336 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 TGFBR3LH3BV60 316 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 GOLGA8RI6L899 631 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 B3GALT2O43825 422 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 WISP2O76076 250 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 KLHL2O95198 593 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 RNF224P0DH78 156 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 EEF1DP29692 281 aaKnown RBP7.83□□□□□ -1.16
ATXN2-220ENST00000550236 SERPINB8P50452 374 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 NEK2P51955 445 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 SLC26A5P58743 744 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 LSM11P83369 360 aaKnown RBP eCLIP7.83□□□□□ -1.16
ATXN2-220ENST00000550236 OC90Q02509 493 aaPredicted RBP7.83□□□□□ -1.16
ATXN2-220ENST00000550236 SLC13A2Q13183 592 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 TLR1Q15399 786 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 FAM83EQ2M2I3 478 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 GLE1Q53GS7 698 aaKnown RBP7.83□□□□□ -1.16
ATXN2-220ENST00000550236 MED27Q6P2C8 311 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 TRIM40Q6P9F5 258 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 IGFL2Q6UWQ7 119 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 LRRC70Q7Z2Q7 622 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 HPS6Q86YV9 775 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 IFT20Q8IY31 132 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 PTGR2Q8N8N7 351 aaPredicted RBP7.83□□□□□ -1.16
ATXN2-220ENST00000550236 PLPP5Q8NEB5 264 aa7.83□□□□□ -1.16
ATXN2-220ENST00000550236 PPP4R1Q8TF05 950 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms