RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 PHOX2BQ99453 314 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 AIF1LQ9BQI0 150 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 KCNK12Q9HB15 430 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 UNC13CQ8NB66 2214 aa12.17□□□□□ -0.46
SCAF11-209ENST00000547018 TRBV5-3A0A0A0MS03 114 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 LOC100130705A0A1B0GUX0 176 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 PLPP1O14494 284 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 ERI3O43414 337 aaKnown RBP12.16□□□□□ -0.46
SCAF11-209ENST00000547018 CCNDBP1O95273 360 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 EML2O95834 649 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 CDH2P19022 906 aaPredicted RBP12.16□□□□□ -0.46
SCAF11-209ENST00000547018 COL9A1P20849 921 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 ACADLP28330 430 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 ASMTP46597 345 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 SPIBQ01892 262 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 C1orf61Q13536 156 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 CDKL4Q5MAI5 379 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 MFSD2AQ8NA29 543 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 C11orf65Q8NCR3 313 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 EZH1Q92800 747 aaPredicted RBP12.16□□□□□ -0.46
SCAF11-209ENST00000547018 DPH7Q9BTV6 452 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 IRAK4Q9NWZ3 460 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 FAM120CQ9NX05 1096 aaKnown RBP12.16□□□□□ -0.46
SCAF11-209ENST00000547018 RSL24D1Q9UHA3 163 aaKnown RBP12.16□□□□□ -0.46
SCAF11-209ENST00000547018 SAMD4AQ9UPU9 718 aaKnown RBP12.16□□□□□ -0.46
SCAF11-209ENST00000547018 CACNA1CQ13936 2221 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 PSMD11O00231 422 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 BCKDKO14874 412 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 NDUFS4O43181 175 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 BCHEP06276 602 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 STT3AP46977 705 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 KCNC3Q14003 757 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 SCARB2Q14108 478 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 ADRM1Q16186 407 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 MPEG1Q2M385 716 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 FGD3Q5JSP0 725 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 LRIF1Q5T3J3 769 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 CEACAM20Q6UY09 585 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 RLN3Q8WXF3 142 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 KRT84Q9NSB2 600 aa12.16□□□□□ -0.46
SCAF11-209ENST00000547018 FAM220BPB1ANY3 271 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 TRPC1P48995 793 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 LRRC32Q14392 662 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 CTU2Q2VPK5 515 aaKnown RBP12.15□□□□□ -0.46
SCAF11-209ENST00000547018 DCP2Q8IU60 420 aaKnown RBP12.15□□□□□ -0.46
SCAF11-209ENST00000547018 OR4N5Q8IXE1 308 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 SHISA5Q8N114 240 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 ZCCHC7Q8N3Z6 543 aaKnown RBP12.15□□□□□ -0.46
SCAF11-209ENST00000547018 OCEL1Q9H607 264 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 ADPRHL2Q9NX46 363 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 THUMPD1Q9NXG2 353 aaKnown RBP12.15□□□□□ -0.46
SCAF11-209ENST00000547018 SCHIP1Q9P0W5 487 aaPredicted RBP12.15□□□□□ -0.46
SCAF11-209ENST00000547018 C3orf18Q9UK00 162 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 GMPPBQ9Y5P6 360 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 CEPT1Q9Y6K0 416 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 GSAPA4D1B5 854 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 AHCYL1O43865 530 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 VEGFDO43915 354 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 TRMUO75648 421 aaKnown RBP12.15□□□□□ -0.46
SCAF11-209ENST00000547018 FESP07332 822 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 MAP2K4P45985 399 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 RAD23AP54725 363 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 OLR1P78380 273 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 RAB39AQ14964 217 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 MLF2Q15773 248 aaPredicted RBP12.15□□□□□ -0.46
SCAF11-209ENST00000547018 KLHL17Q6TDP4 642 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 VN1R5Q7Z5H4 357 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 CCDC116Q8IYX3 515 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 TAGAPQ8N103 731 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 CACTIN-AS1Q8N1I8 211 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 RBM4BQ9BQ04 359 aaKnown RBP12.15□□□□□ -0.46
SCAF11-209ENST00000547018 RBM4Q9BWF3 364 aaKnown RBP12.15□□□□□ -0.46
SCAF11-209ENST00000547018 TMEM184CQ9NVA4 438 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 TOR1BO14657 336 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 KMOO15229 486 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 CCR8P51685 355 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 APOFQ13790 326 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 TMEM236Q5W0B7 351 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 ZNF776Q68DI1 518 aaPredicted RBP12.15□□□□□ -0.46
SCAF11-209ENST00000547018 XKR5Q6UX68 686 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 DEF8Q6ZN54 512 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 OR9Q2Q8NGE9 314 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 PRR14Q9BWN1 585 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 NLNQ9BYT8 704 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 RLIMQ9NVW2 624 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 SIRT5Q9NXA8 310 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 DMTF1Q9Y222 760 aa12.15□□□□□ -0.46
SCAF11-209ENST00000547018 A0A0J9YVX5 310 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 K7EQS6 105 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 TMPRSS11DO60235 418 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 DAPP51397 102 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 PHEXP78562 749 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 CDK6Q00534 326 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 ANXA8L1Q5VT79 327 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 METRNLQ641Q3 311 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 CPZQ66K79 652 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.14□□□□□ -0.47
SCAF11-209ENST00000547018 TTC29Q8NA56 475 aaPredicted RBP12.14□□□□□ -0.47
SCAF11-209ENST00000547018 OR52E1Q8NGJ3 308 aa12.14□□□□□ -0.47
SCAF11-209ENST00000547018 OR5K1Q8NHB7 308 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms