RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 CXorf57Q6NSI4 855 aaKnown RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 KRT77Q7Z794 578 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 CLECL1Q8IZS7 167 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 SPAG16Q8N0X2 631 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 OR8H3Q8N146 312 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 CHST14Q8NCH0 376 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 SRFBP1Q8NEF9 429 aaKnown RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 HUS1BQ8NHY5 278 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 ZNF296Q8WUU4 475 aaPredicted RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 TESCQ96BS2 214 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 COL21A1Q96P44 957 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 EPYCQ99645 322 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 SMAD5Q99717 465 aaKnown RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 MYOCQ99972 504 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 BCL7BQ9BQE9 202 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 GSDMCQ9BYG8 508 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 UCK2Q9BZX2 261 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 DCSTAMPQ9H295 470 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 TMEM138Q9NPI0 162 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 PTGFRNQ9P2B2 879 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 PLCL2Q9UPR0 1127 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 USP22Q9UPT9 525 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 RNF6Q9Y252 685 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 TMEM98Q9Y2Y6 226 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 OTOFQ9HC10 1997 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 OR14I1A6ND48 311 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 J3QRK9 145 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 ITGBL1O95965 494 aaPredicted RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 ALPPP05187 535 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 RHOP08100 348 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 ZDHHC11BP0C7U3 371 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 MTHFD2P13995 350 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 SDC1P18827 310 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 KDELR2P33947 212 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 SEC13P55735 322 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 AP3S2P59780 193 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 PRR5P85299 388 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 RHAGQ02094 409 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 ZNHIT3Q15649 155 aaPredicted RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 NHSL2Q5HYW2 709 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 COLEC12Q5KU26 742 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 MPP7Q5T2T1 576 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 ZNF691Q5VV52 312 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 TMEM236Q5W0B7 351 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 CPZQ66K79 652 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 XKR5Q6UX68 686 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 CEACAM20Q6UY09 585 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 ZNF367Q7RTV3 350 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 DCUN1D3Q8IWE4 304 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 ADGRG2Q8IZP9 1017 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 RNASE11Q8TAA1 199 aaKnown RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 ADAMTS15Q8TE58 950 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 FRS2Q8WU20 508 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 SLC38A4Q969I6 547 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 DIRAS2Q96HU8 199 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 ALPK1Q96QP1 1244 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 UHRF1Q96T88 793 aaPredicted RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 PIP5K1AQ99755 562 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 C1QTNF3Q9BXJ4 246 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 OR2B2Q9GZK3 357 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 WDR26Q9H7D7 661 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 BTNL2Q9UIR0 455 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 CDC14AQ9UNH5 594 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 ABCG2Q9UNQ0 655 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 ISPDA4D126 451 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 PGRMC2O15173 223 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 MITFO75030 526 aaPredicted RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 TFAP2AP05549 437 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 DCKP27707 260 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 HOXC8P31273 242 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 CCR7P32248 378 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 WASP42768 502 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 RORCP51449 518 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 MEF2AQ02078 507 aaPredicted RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 FPGSQ05932 587 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 RBBP4Q09028 425 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 NFATC3Q12968 1075 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 FADDQ13158 208 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 SUSD1Q6UWL2 747 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 SBSNQ6UWP8 590 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 DPPA4Q7L190 304 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 MMAAQ8IVH4 418 aaKnown RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 HDDC3Q8N4P3 179 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 MYEOVQ96EZ4 313 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 FUNDC2Q9BWH2 189 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 ZNFX1Q9P2E3 1918 aaKnown RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 PLXNA1Q9UIW2 1896 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 PLOD2O00469 737 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 DYRK3O43781 588 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 TPST2O60704 377 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 KHDRBS3O75525 346 aaKnown RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 JRKO75564 520 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 H1F0P07305 194 aaKnown RBP5.56□□□□□ -1.52
VPS50-220ENST00000544910 IL3P08700 152 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 CTSAP10619 480 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 AOAHP28039 575 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 HTR1BP28222 390 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 RYKP34925 604 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 HK3P52790 923 aa5.56□□□□□ -1.52
VPS50-220ENST00000544910 SLC9A5Q14940 896 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms