RNA–Protein interactions for RNA: ENST00000544755.1

PDCD2-212, Transcript of programmed cell death 2, humanhuman

TSL 2

Gene PDCD2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-212ENST00000544755 SPTA1P02549 2419 aa14.41□□□□□ -0.1
PDCD2-212ENST00000544755 TLN1Q9Y490 2541 aaKnown RBP14.4□□□□□ -0.1
PDCD2-212ENST00000544755 CCDC151A5D8V7 595 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 GOLGA8RI6L899 631 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 FOXE1O00358 373 aaPredicted RBP14.4□□□□□ -0.1
PDCD2-212ENST00000544755 CLDN4O14493 209 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 IMPDH1P20839 514 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 HNRNPH1P31943 449 aaKnown RBP14.4□□□□□ -0.1
PDCD2-212ENST00000544755 BTN3A2P78410 334 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 MAT1AQ00266 395 aaKnown RBP14.4□□□□□ -0.1
PDCD2-212ENST00000544755 CUL3Q13618 768 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 SYT16Q17RD7 645 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 AP5B1Q2VPB7 878 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 KHDRBS2Q5VWX1 349 aaKnown RBP14.4□□□□□ -0.1
PDCD2-212ENST00000544755 JMJD6Q6NYC1 403 aaPredicted RBP14.4□□□□□ -0.1
PDCD2-212ENST00000544755 ABHD17CQ6PCB6 329 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 QSOX2Q6ZRP7 698 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 LAPTM4BQ86VI4 370 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 HUS1BQ8NHY5 278 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 ZNF483Q8TF39 744 aaPredicted RBP14.4□□□□□ -0.1
PDCD2-212ENST00000544755 L3HYPDHQ96EM0 354 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 PEX11GQ96HA9 241 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 SMAD5Q99717 465 aaKnown RBP14.4□□□□□ -0.1
PDCD2-212ENST00000544755 TUBB6Q9BUF5 446 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 VN1R1Q9GZP7 353 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 ZNF700Q9H0M5 742 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 NOL11Q9H8H0 719 aaKnown RBP14.4□□□□□ -0.1
PDCD2-212ENST00000544755 LYRM4Q9HD34 91 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.4□□□□□ -0.1
PDCD2-212ENST00000544755 RALYQ9UKM9 306 aaKnown RBP14.4□□□□□ -0.1
PDCD2-212ENST00000544755 MMACHCQ9Y4U1 282 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 V9GYY5 206 aaPredicted RBP14.4□□□□□ -0.1
PDCD2-212ENST00000544755 MED13Q9UHV7 2174 aa14.4□□□□□ -0.1
PDCD2-212ENST00000544755 ATRXP46100 2492 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 TLDC2A0PJX2 215 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 ZNF860A6NHJ4 632 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 SMIM23A6NLE4 172 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 B8ZZF3 427 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 PRMT3O60678 531 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 DPM1O60762 260 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 SEMA3DO95025 777 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 SCELO95171 688 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 MYL2P10916 166 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 KRT4P19013 534 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 ITGA3P26006 1051 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 RAP1GDS1P52306 607 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 PRKAA2P54646 552 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 ZNF33BQ06732 778 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 ASPHQ12797 758 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 KLRB1Q12918 225 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 IFT88Q13099 833 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 EXT1Q16394 746 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 CPSF6Q16630 551 aaKnown RBP eCLIP14.39□□□□□ -0.11
PDCD2-212ENST00000544755 DEPDC1Q5TB30 811 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 FRG2Q64ET8 278 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 SH2D5Q6ZV89 423 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 ASB18Q6ZVZ8 466 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 VN1R5Q7Z5H4 357 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 MILR1Q7Z6M3 343 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 KBTBD2Q8IY47 623 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 ZNF843Q8N446 348 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 RGMAQ96B86 450 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 FRG2BQ96QU4 278 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 SERPINI1Q99574 410 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 LHPPQ9H008 270 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 KLHL31Q9H511 634 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 DMRT3Q9NQL9 472 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 PRDM9Q9NQV7 894 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 NMRK1Q9NWW6 199 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 MS4A12Q9NXJ0 267 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 SNX6Q9UNH7 406 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 TP53TG5Q9Y2B4 290 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 ATMQ13315 3056 aa14.39□□□□□ -0.11
PDCD2-212ENST00000544755 IGHV1-45A0A0A0MS14 117 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 A0A1W2PPM1 405 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 OR7A17O14581 309 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 DLX3O60479 287 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 DNAJB5O75953 348 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 SUPT7LO94864 414 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 SERPINA7P05543 415 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 SBK3P0C264 359 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 COX6A1P12074 109 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 DEKP35659 375 aaKnown RBP14.38□□□□□ -0.11
PDCD2-212ENST00000544755 PLA2G16P53816 162 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 PKNOX1P55347 436 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 HSD17B7P56937 341 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 RAB38P57729 211 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 CLCQ05315 142 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 SLC18A2Q05940 514 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 NFATC3Q12968 1075 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 CHAF1BQ13112 559 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 TRAF3Q13114 568 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 ABRAXAS2Q15018 415 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 ZRSR2Q15696 482 aaKnown RBP14.38□□□□□ -0.11
PDCD2-212ENST00000544755 NSDHLQ15738 373 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 ZNF678Q5SXM1 525 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 AGAP7PQ5VUJ5 663 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 TTC19Q6DKK2 380 aaPredicted RBP14.38□□□□□ -0.11
PDCD2-212ENST00000544755 ZYG11AQ6WRX3 759 aa14.38□□□□□ -0.11
PDCD2-212ENST00000544755 CPEB2Q7Z5Q1 589 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms