RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 AGR3Q8TD06 166 aa12.91□□□□□ -0.34
SP140-213ENST00000543928 FKBP10Q96AY3 582 aa12.91□□□□□ -0.34
SP140-213ENST00000543928 RGMAQ96B86 450 aa12.91□□□□□ -0.34
SP140-213ENST00000543928 KCNC2Q96PR1 638 aa12.91□□□□□ -0.34
SP140-213ENST00000543928 SERPINI1Q99574 410 aa12.91□□□□□ -0.34
SP140-213ENST00000543928 CENPKQ9BS16 269 aa12.91□□□□□ -0.34
SP140-213ENST00000543928 YIPF2Q9BWQ6 316 aa12.91□□□□□ -0.34
SP140-213ENST00000543928 MANSC1Q9H8J5 431 aa12.91□□□□□ -0.34
SP140-213ENST00000543928 BRF2Q9HAW0 419 aa12.91□□□□□ -0.34
SP140-213ENST00000543928 PRDM7Q9NQW5 492 aa12.91□□□□□ -0.34
SP140-213ENST00000543928 HCN3Q9P1Z3 774 aa12.91□□□□□ -0.34
SP140-213ENST00000543928 TRPC4Q9UBN4 977 aa12.91□□□□□ -0.34
SP140-213ENST00000543928 CTSFQ9UBX1 484 aa12.91□□□□□ -0.34
SP140-213ENST00000543928 SLC12A4Q9UP95 1085 aa12.91□□□□□ -0.34
SP140-213ENST00000543928 TRAF6Q9Y4K3 522 aa12.91□□□□□ -0.34
SP140-213ENST00000543928 MAP4K5Q9Y4K4 846 aa12.91□□□□□ -0.34
SP140-213ENST00000543928 A0A088AWK7 358 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 RTCAO00442 366 aaKnown RBP12.9□□□□□ -0.34
SP140-213ENST00000543928 DNAJB6O75190 326 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 FGF4P08620 206 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 RAB40ALP0C0E4 278 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 HSD3B1P14060 373 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 ZNF10P21506 573 aaPredicted RBP12.9□□□□□ -0.34
SP140-213ENST00000543928 F8A1P23610 371 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 HSD3B2P26439 372 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 MTTPP55157 894 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 RPS15P62841 145 aaKnown RBP12.9□□□□□ -0.34
SP140-213ENST00000543928 ZNF33BQ06732 778 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 CSTF3Q12996 717 aaKnown RBP12.9□□□□□ -0.34
SP140-213ENST00000543928 AP5B1Q2VPB7 878 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 ATG16L1Q676U5 607 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 MRPL14Q6P1L8 145 aaKnown RBP12.9□□□□□ -0.34
SP140-213ENST00000543928 LRRC69Q6ZNQ3 347 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 OVCH1Q7RTY7 1134 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 CLYBLQ8N0X4 340 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 OR5T3Q8NGG3 340 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 RAB3IL1Q8TBN0 382 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 DYDC1Q8WWB3 177 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 QRFPRQ96P65 431 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 SORT1Q99523 831 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 TBCDQ9BTW9 1192 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 SORBS1Q9BX66 1292 aaKnown RBP12.9□□□□□ -0.34
SP140-213ENST00000543928 GPR87Q9BY21 358 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 ACPTQ9BZG2 426 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 C20orf27Q9GZN8 174 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 COPS7BQ9H9Q2 264 aaPredicted RBP12.9□□□□□ -0.34
SP140-213ENST00000543928 INTS9Q9NV88 658 aaKnown RBP12.9□□□□□ -0.34
SP140-213ENST00000543928 ZNF282Q9UDV7 671 aaPredicted RBP12.9□□□□□ -0.34
SP140-213ENST00000543928 IL17BQ9UHF5 180 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 ZDHHC2Q9UIJ5 367 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 KCND3Q9UK17 655 aa12.9□□□□□ -0.34
SP140-213ENST00000543928 PLPP1O14494 284 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 CHST10O43529 356 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 B3GALT2O43825 422 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 CNOT3O75175 753 aaKnown RBP12.89□□□□□ -0.35
SP140-213ENST00000543928 SNNO75324 88 aaPredicted RBP12.89□□□□□ -0.35
SP140-213ENST00000543928 SEMA3DO95025 777 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 SNUPNO95149 360 aaKnown RBP12.89□□□□□ -0.35
SP140-213ENST00000543928 CHEK2O96017 543 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 ALBP02768 609 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 CERS1P27544 350 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 PTPN4P29074 926 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 SSR2P43308 183 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 ARFIP1P53367 373 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 FOXL2P58012 376 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 RPS18P62269 152 aaKnown RBP12.89□□□□□ -0.35
SP140-213ENST00000543928 OCA2Q04671 838 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 NKG7Q16617 165 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 VWA2Q5GFL6 755 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 FAM69BQ5VUD6 431 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 OR4C11Q6IEV9 310 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 ZNF793Q6ZN11 406 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 SHISA5Q8N114 240 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 ZNF781Q8N8C0 355 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 GBP7Q8N8V2 638 aaPredicted RBP12.89□□□□□ -0.35
SP140-213ENST00000543928 ACOT4Q8N9L9 421 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 OR51Q1Q8NH59 317 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 STT3BQ8TCJ2 826 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 CNTNAP3BQ96NU0 1288 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 CCNL2Q96S94 520 aaPredicted RBP12.89□□□□□ -0.35
SP140-213ENST00000543928 SERINC2Q96SA4 455 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 EFHD1Q9BUP0 239 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 MRPL1Q9BYD6 325 aaKnown RBP12.89□□□□□ -0.35
SP140-213ENST00000543928 CNTNAP3Q9BZ76 1288 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 ROGDIQ9GZN7 287 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 ILKAPQ9H0C8 392 aaPredicted RBP12.89□□□□□ -0.35
SP140-213ENST00000543928 SLC26A1Q9H2B4 701 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 ACTL8Q9H568 366 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 MKKSQ9NPJ1 570 aaPredicted RBP12.89□□□□□ -0.35
SP140-213ENST00000543928 THAP1Q9NVV9 213 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 NMRK1Q9NWW6 199 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 VPS29Q9UBQ0 182 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 FARSAQ9Y285 508 aaKnown RBP12.89□□□□□ -0.35
SP140-213ENST00000543928 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.89□□□□□ -0.35
SP140-213ENST00000543928 PADI2Q9Y2J8 665 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 RAP2CQ9Y3L5 183 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 PCDHGA6Q9Y5G7 932 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 DNAJC15Q9Y5T4 150 aa12.89□□□□□ -0.35
SP140-213ENST00000543928 MRPS18BQ9Y676 258 aaKnown RBP12.89□□□□□ -0.35
SP140-213ENST00000543928 ANKRD11Q6UB99 2663 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms