RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 DBPQ10586 325 aaPredicted RBP13.09□□□□□ -0.31
BNIP3-202ENST00000540159 ST3GAL4Q11206 333 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 CSTF3Q12996 717 aaKnown RBP13.09□□□□□ -0.31
BNIP3-202ENST00000540159 KEAP1Q14145 624 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 DOC2BQ14184 412 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 SLCO4C1Q6ZQN7 724 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 TAGAPQ8N103 731 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 OR52E4Q8NGH9 312 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 OR5AR1Q8NGP9 310 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 GGHQ92820 318 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 OR5M11Q96RB7 305 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 KCNS3Q9BQ31 491 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 WFDC6Q9BQY6 131 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 KLHL25Q9H0H3 589 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 NAALAD2Q9Y3Q0 740 aa13.09□□□□□ -0.31
BNIP3-202ENST00000540159 PIPSLA2A3N6 862 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 SERPINB7O75635 380 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 RHOP08100 348 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 CD97P48960 835 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 WDR5P61964 334 aaKnown RBP13.08□□□□□ -0.32
BNIP3-202ENST00000540159 SELENOWP63302 87 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 PROX2Q3B8N5 592 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 MPP7Q5T2T1 576 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 CNKSR3Q6P9H4 555 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 ADCK2Q7Z695 626 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 FAM9CQ8IZT9 166 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 AQP11Q8NBQ7 271 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 LRRC3BQ96PB8 259 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 FAM129BQ96TA1 746 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 CPEB1Q9BZB8 566 aaKnown RBP13.08□□□□□ -0.32
BNIP3-202ENST00000540159 SLIRPQ9GZT3 109 aaKnown RBP13.08□□□□□ -0.32
BNIP3-202ENST00000540159 TBCCD1Q9NVR7 557 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 PCDHGB3Q9Y5G1 929 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 OR2A25A4D2G3 310 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 KPNA4O00629 521 aaPredicted RBP13.08□□□□□ -0.32
BNIP3-202ENST00000540159 PRKRAO75569 313 aaKnown RBP13.08□□□□□ -0.32
BNIP3-202ENST00000540159 BCHEP06276 602 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 LAG3P18627 525 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 GPR1P46091 355 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 TGM4P49221 684 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 LSM11P83369 360 aaKnown RBP eCLIP13.08□□□□□ -0.322e-8■■■□□ 17.3
BNIP3-202ENST00000540159 ZNF763Q0D2J5 394 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 SYT6Q5T7P8 510 aaPredicted RBP13.08□□□□□ -0.32
BNIP3-202ENST00000540159 ERICH5Q6P6B1 374 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 BRAT1Q6PJG6 821 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 WDR53Q7Z5U6 358 aaPredicted RBP13.08□□□□□ -0.32
BNIP3-202ENST00000540159 ZNF605Q86T29 641 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 HEATR4Q86WZ0 1026 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 MFSD4AQ8N468 514 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 YIPF4Q9BSR8 244 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 SLC6A16Q9GZN6 736 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 TPK1Q9H3S4 243 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 DSN1Q9H410 356 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 MARCH7Q9H992 704 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 OBSL1O75147 1896 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 SCN3AQ9NY46 2000 aa13.08□□□□□ -0.32
BNIP3-202ENST00000540159 ZNF197O14709 1029 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 LZTS3O60299 673 aaPredicted RBP13.07□□□□□ -0.32
BNIP3-202ENST00000540159 C1orf105O95561 183 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 DLGAP3O95886 979 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 ALOX12P18054 663 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 WASP42768 502 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 SERPINB10P48595 397 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 MVDP53602 400 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 CDK6Q00534 326 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 SP140Q13342 867 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 ZC3H12BQ5HYM0 836 aaKnown RBP13.07□□□□□ -0.32
BNIP3-202ENST00000540159 GCNT6Q5T4J0 391 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 DEF8Q6ZN54 512 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 OR6Q1Q8NGQ2 317 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 PHF10Q8WUB8 498 aaKnown RBP13.07□□□□□ -0.32
BNIP3-202ENST00000540159 CHTF18Q8WVB6 975 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 NXPE3Q969Y0 559 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 EXOSC8Q96B26 276 aaKnown RBP13.07□□□□□ -0.32
BNIP3-202ENST00000540159 ZSCAN5AQ9BUG6 496 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 BTBD2Q9BX70 525 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 ITPAQ9BY32 194 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 AP3M1Q9Y2T2 418 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 DYRK1BQ9Y463 629 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 SEMG1P04279 462 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 IL18R1Q13478 541 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 HIST2H2ACQ16777 129 aaPredicted RBP13.07□□□□□ -0.32
BNIP3-202ENST00000540159 NIPAL1Q6NVV3 410 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 PRSS48Q7RTY5 328 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 SVOPQ8N4V2 548 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 C12orf76Q8N812 135 aaPredicted RBP13.07□□□□□ -0.32
BNIP3-202ENST00000540159 POC5Q8NA72 575 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 DNAJB8Q8NHS0 232 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 ZNF675Q8TD23 568 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 KLK6Q92876 244 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 ZNF689Q96CS4 500 aaPredicted RBP13.07□□□□□ -0.32
BNIP3-202ENST00000540159 F2RL3Q96RI0 385 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 REEP4Q9H6H4 257 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 FAM32AQ9Y421 112 aaKnown RBP13.07□□□□□ -0.32
BNIP3-202ENST00000540159 A0A1W2PRB8 838 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 TRBC2A0A5B9 178 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 H0YIV9 168 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 EPCAMP16422 314 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 JUNDP17535 347 aa13.07□□□□□ -0.32
BNIP3-202ENST00000540159 PRKAG1P54619 331 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms