RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	DNASE1L3	Q13609	305 aa		18.87	■□□□□ 0.61
FGFR1-238	ENST00000532791	MR1	Q95460	341 aa		18.87	■□□□□ 0.61
FGFR1-238	ENST00000532791	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	18.87	■□□□□ 0.61
FGFR1-238	ENST00000532791	RBCK1	Q9BYM8	510 aa		18.87	■□□□□ 0.61
FGFR1-238	ENST00000532791	EHD1	Q9H4M9	534 aa		18.87	■□□□□ 0.61
FGFR1-238	ENST00000532791	SPHK2	Q9NRA0	654 aa		18.87	■□□□□ 0.61
FGFR1-238	ENST00000532791	CBL	P22681	906 aa		18.87	■□□□□ 0.61
FGFR1-238	ENST00000532791	HNF1B	P35680	557 aa		18.87	■□□□□ 0.61
FGFR1-238	ENST00000532791	RHD	Q02161	417 aa		18.87	■□□□□ 0.61
FGFR1-238	ENST00000532791	FAM214A	Q32MH5	1076 aa		18.87	■□□□□ 0.61
FGFR1-238	ENST00000532791	FLYWCH1	Q4VC44	716 aa		18.87	■□□□□ 0.61
FGFR1-238	ENST00000532791	KIAA1614	Q5VZ46	1190 aa		18.87	■□□□□ 0.61
FGFR1-238	ENST00000532791	SIGLEC10	Q96LC7	697 aa		18.87	■□□□□ 0.61
FGFR1-238	ENST00000532791	HERC2P3	Q9BVR0	1158 aa		18.87	■□□□□ 0.61
FGFR1-238	ENST00000532791	TCRBV21S2A2	A0A5A6	115 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	HSPA12A	O43301	675 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	SNAI1	O95863	264 aa	Predicted RBP	18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	GLP1R	P43220	463 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	UPP1	Q16831	310 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	OR4C15	Q8NGM1	316 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	ZDHHC12	Q96GR4	267 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	DNAJC27	Q9NZQ0	273 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	PRODH2	Q9UF12	536 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791		A0A1W2PPL8	197 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	CD72	P21854	359 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	CLRN1	P58418	232 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	RUNDC3A	Q59EK9	446 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	SLC44A3	Q8N4M1	653 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	SHKBP1	Q8TBC3	707 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	PLEKHO2	Q8TD55	490 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	WDR77	Q9BQA1	342 aa	Predicted RBP	18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	MYO5B	Q9ULV0	1848 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	GJB5	O95377	273 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	MT-ND5	P03915	603 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	PFKL	P17858	780 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	SLC35F1	Q5T1Q4	408 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	KLHDC10	Q6PID8	442 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	BBS10	Q8TAM1	723 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	THAP6	Q8TBB0	222 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	FUZ	Q9BT04	418 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	POLDIP3	Q9BY77	421 aa	Known RBP	18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	PCDHB16	Q9NRJ7	776 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	MS4A12	Q9NXJ0	267 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	LOC100509620	A0A075B734	347 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	ZNF860	A6NHJ4	632 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791		H0YJX3	145 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	OAZ2	O95190	189 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	RHO	P08100	348 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	SEC23B	Q15437	767 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	LIPJ	Q5W064	366 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	OR2L2	Q8NH16	312 aa		18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	AURKB	Q96GD4	344 aa	Predicted RBP	18.86	■□□□□ 0.61
FGFR1-238	ENST00000532791	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	PROM1	O43490	865 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	PTN	P21246	168 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	F8A1	P23610	371 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	ATP4B	P51164	291 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	BNIP3	Q12983	259 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	RPF2	Q9H7B2	306 aa	Known RBP	18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	IL21R	Q9HBE5	538 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	LRRC42	Q9Y546	428 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	PAK4	O96013	591 aa	Predicted RBP	18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	MECP2	P51608	486 aa	Known RBP	18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	GNG2	P59768	71 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	TUBA1B	P68363	451 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	TUBA4A	P68366	448 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	TUBA3C	Q13748	450 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	MEP1A	Q16819	746 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	NCEH1	Q6PIU2	408 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	TUBA1A	Q71U36	451 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	ZNF550	Q7Z398	422 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	ARHGAP9	Q9BRR9	750 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	STRADB	Q9C0K7	418 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	GLS2	Q9UI32	602 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	IFT52	Q9Y366	437 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	ALG5	Q9Y673	324 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	TSPAN6	O43657	245 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	VEGFD	O43915	354 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	LMAN2	Q12907	356 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	GPAT4	Q86UL3	456 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	TRAM1L1	Q8N609	369 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	SCAMP4	Q969E2	229 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	RAB7B	Q96AH8	199 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	STYXL1	Q9Y6J8	313 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	SLC33A1	O00400	549 aa	Predicted RBP	18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	SRC	P12931	536 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	TUBA3E	Q6PEY2	450 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	TCEANC	Q8N8B7	351 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	TMEM41A	Q96HV5	264 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	ZNF382	Q96SR6	550 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	RAD9A	Q99638	391 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	ASB6	Q9NWX5	421 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	PCDHGB6	Q9Y5F9	930 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	PSAT1	Q9Y617	370 aa		18.85	■□□□□ 0.61
FGFR1-238	ENST00000532791	SLC35F4	A4IF30	521 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	ZNF487	B1APH4	448 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	BCAS2	O75934	225 aa	Predicted RBP	18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	ACADVL	P49748	655 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	C10orf62	Q5T681	223 aa	Predicted RBP	18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	TMED4	Q7Z7H5	227 aa		18.84	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms