RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 CEACAM1P13688 526 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 GAP43P17677 238 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 RPL35AP18077 110 aaKnown RBP3.97□□□□□ -1.77
C11orf88-204ENST00000529661 SOX3P41225 446 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 GFPT1Q06210 699 aaPredicted RBP3.97□□□□□ -1.77
C11orf88-204ENST00000529661 GRB14Q14449 540 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 GTDC1Q4AE62 458 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 DNAJC21Q5F1R6 531 aaKnown RBP3.97□□□□□ -1.77
C11orf88-204ENST00000529661 ZNF772Q68DY9 489 aaPredicted RBP3.97□□□□□ -1.77
C11orf88-204ENST00000529661 ZNF497Q6ZNH5 498 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 CYP4V2Q6ZWL3 525 aaPredicted RBP3.97□□□□□ -1.77
C11orf88-204ENST00000529661 NOTCH2NLQ7Z3S9 236 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 TRMT11Q7Z4G4 463 aaKnown RBP3.97□□□□□ -1.77
C11orf88-204ENST00000529661 LACC1Q8IV20 430 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 RNF149Q8NC42 400 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 NEK11Q8NG66 645 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 KIAA1524Q8TCG1 905 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 URGCPQ8TCY9 931 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 ZNRF4Q8WWF5 429 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 HAS2Q92819 552 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 AZIN2Q96A70 460 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 NEDD4LQ96PU5 975 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 RUFY1Q96T51 708 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 MYCBPQ99417 103 aaPredicted RBP3.97□□□□□ -1.77
C11orf88-204ENST00000529661 CCM2Q9BSQ5 444 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 TMEM245Q9H330 911 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 RNF186Q9NXI6 227 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 TMOD3Q9NYL9 352 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 UBQLN2Q9UHD9 624 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 PSORS1C1Q9UIG5 152 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 TSPAN16Q9UKR8 245 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 KCNK6Q9Y257 313 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 MRPS28Q9Y2Q9 187 aaKnown RBP3.97□□□□□ -1.77
C11orf88-204ENST00000529661 STRAPQ9Y3F4 350 aaKnown RBP3.97□□□□□ -1.77
C11orf88-204ENST00000529661 COLEC10Q9Y6Z7 277 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 SMCHD1A6NHR9 2005 aa3.97□□□□□ -1.77
C11orf88-204ENST00000529661 NEDD4P46934 1319 aa3.96□□□□□ -1.77
C11orf88-204ENST00000529661 TRBV2A0A0J9YWF9 115 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 A0A1B0GU03 582 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 C2orf92A0A1B0GVN3 265 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 SLC15A5A6NIM6 579 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 NKX6-3A6NJ46 265 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 SRRM4A7MD48 611 aaKnown RBP3.96□□□□□ -1.78
C11orf88-204ENST00000529661 TLR4O00206 839 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 NR5A2O00482 541 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 PSMD3O43242 534 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 SYT7O43581 403 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 EPOP01588 193 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 ABHD2P08910 425 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 PRKAR1AP10644 381 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 ODC1P11926 461 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 CPA3P15088 417 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 AADACP22760 399 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 AHCYP23526 432 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 ZNF131P52739 623 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 KRTAP10-5P60370 271 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 GABPAQ06546 454 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 LCP2Q13094 533 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 GPR50Q13585 617 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 ITGA9Q13797 1035 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 EFTUD2Q15029 972 aaKnown RBP eCLIP3.96□□□□□ -1.78
C11orf88-204ENST00000529661 STX1AQ16623 288 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 ZFP69Q49AA0 526 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 ZC2HC1BQ5TFG8 222 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 ARHGEF16Q5VV41 709 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 PLPP4Q5VZY2 271 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 ZNF776Q68DI1 518 aaPredicted RBP3.96□□□□□ -1.78
C11orf88-204ENST00000529661 TCEAL6Q6IPX3 200 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 MACC1Q6ZN28 852 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 MIER3Q7Z3K6 550 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 ZNF444Q8N0Y2 327 aaPredicted RBP3.96□□□□□ -1.78
C11orf88-204ENST00000529661 TEX26Q8N6G2 289 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 TCEANCQ8N8B7 351 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 SMYD1Q8NB12 490 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 TMEM178AQ8NBL3 297 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 GPRC5AQ8NFJ5 357 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 EXOC6Q8TAG9 804 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 ARHGAP45Q92619 1136 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 CASP10Q92851 521 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 TMEM186Q96B77 213 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 SLCO4A1Q96BD0 722 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 ULK4Q96C45 1275 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 ART5Q96L15 291 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 LURAP1Q96LR2 239 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 SPATA13Q96N96 652 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 IL12RB2Q99665 862 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 PKP2Q99959 881 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 FAM213AQ9BRX8 229 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 FUCA2Q9BTY2 467 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 NTMT1Q9BV86 223 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 TDRD1Q9BXT4 1180 aaKnown RBP3.96□□□□□ -1.78
C11orf88-204ENST00000529661 DPEP2Q9H4A9 486 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 ZCCHC3Q9NUD5 404 aaKnown RBP3.96□□□□□ -1.78
C11orf88-204ENST00000529661 POLKQ9UBT6 870 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 POMT2Q9UKY4 750 aa3.96□□□□□ -1.78
C11orf88-204ENST00000529661 SNED1Q8TER0 1413 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 A0A087WW49 117 aa3.95□□□□□ -1.78
C11orf88-204ENST00000529661 A0A087WZ39 114 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms