RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 PTGES3Q15185 160 aaKnown RBP9.48□□□□□ -0.89
SF3B2-206ENST00000528302 LRIF1Q5T3J3 769 aa9.48□□□□□ -0.89
SF3B2-206ENST00000528302 CERS6Q6ZMG9 384 aa9.48□□□□□ -0.89
SF3B2-206ENST00000528302 CBLL1Q75N03 491 aa9.48□□□□□ -0.89
SF3B2-206ENST00000528302 GALNT12Q8IXK2 581 aa9.48□□□□□ -0.89
SF3B2-206ENST00000528302 KBTBD8Q8NFY9 601 aa9.48□□□□□ -0.89
SF3B2-206ENST00000528302 OTULINQ96BN8 352 aa9.48□□□□□ -0.89
SF3B2-206ENST00000528302 BRD9Q9H8M2 597 aa9.48□□□□□ -0.89
SF3B2-206ENST00000528302 CPNE5Q9HCH3 593 aa9.48□□□□□ -0.89
SF3B2-206ENST00000528302 TAS2R9Q9NYW1 312 aa9.48□□□□□ -0.89
SF3B2-206ENST00000528302 CARD8Q9Y2G2 431 aa9.48□□□□□ -0.89
SF3B2-206ENST00000528302 TMEM98Q9Y2Y6 226 aa9.48□□□□□ -0.89
SF3B2-206ENST00000528302 PCDHGB3Q9Y5G1 929 aa9.48□□□□□ -0.89
SF3B2-206ENST00000528302 PRRG1O14668 218 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 CPNE3O75131 537 aaKnown RBP9.47□□□□□ -0.89
SF3B2-206ENST00000528302 NME6O75414 186 aaPredicted RBP9.47□□□□□ -0.89
SF3B2-206ENST00000528302 PRPS2P11908 318 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 MAGEA2P43356 314 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 UGT2B15P54855 530 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 RPS13P62277 151 aaKnown RBP9.47□□□□□ -0.89
SF3B2-206ENST00000528302 HBA1P69905 142 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 LSM11P83369 360 aaKnown RBP eCLIP9.47□□□□□ -0.892e-6■□□□□ 8.7
SF3B2-206ENST00000528302 RING1Q06587 406 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 GPR17Q13304 367 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 BCL2A1Q16548 175 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 ZNF385BQ569K4 471 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 ALG1LQ6GMV1 187 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 FAM131AQ6UXB0 335 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 DEF8Q6ZN54 512 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 MMAAQ8IVH4 418 aaKnown RBP9.47□□□□□ -0.89
SF3B2-206ENST00000528302 TP53I13Q8NBR0 393 aaPredicted RBP9.47□□□□□ -0.89
SF3B2-206ENST00000528302 ZNF566Q969W8 418 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 TRMT61AQ96FX7 289 aaKnown RBP9.47□□□□□ -0.89
SF3B2-206ENST00000528302 HRASLS5Q96KN8 279 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 SLC30A2Q9BRI3 323 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 DNAJC11Q9NVH1 559 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 PCDHGB1Q9Y5G3 927 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 VWA8A3KMH1 1905 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 PRAMEF33A0A0G2JMD5 474 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 PRAMEF25A6NGN4 478 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 CLDN24A6NM45 220 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 PRAMEF10O60809 474 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 CD70P32970 193 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 HOXC5Q00444 222 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 DSC1Q08554 894 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 RGNQ15493 299 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 ZNF181Q2M3W8 571 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 TCTN1Q2MV58 587 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 LYPD8Q6UX82 237 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 ZNF517Q6ZMY9 492 aaPredicted RBP9.47□□□□□ -0.89
SF3B2-206ENST00000528302 TSEN54Q7Z6J9 526 aaKnown RBP9.47□□□□□ -0.89
SF3B2-206ENST00000528302 RNF180Q86T96 592 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 RBM45Q8IUH3 476 aaKnown RBP9.47□□□□□ -0.89
SF3B2-206ENST00000528302 CADM2Q8N3J6 435 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 IL17RDQ8NFM7 739 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 COQ8BQ96D53 544 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 TXNDC15Q96J42 360 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 C7orf34Q96L11 122 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 PHOX2BQ99453 314 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 SLC35A5Q9BS91 424 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 KCTD5Q9NXV2 234 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 PCDHB7Q9Y5E2 793 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 CFAP20Q9Y6A4 193 aaKnown RBP9.47□□□□□ -0.89
SF3B2-206ENST00000528302 CLCA3PQ9Y6N3 262 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 PCM1Q15154 2024 aa9.47□□□□□ -0.89
SF3B2-206ENST00000528302 A0A1B0GVC2 190 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 A0A1W2PQ09 198 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 A6NIN4 97 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 NOTOA8MTQ0 251 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 MEN1O00255 615 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 SGTAO43765 313 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 ENTPD6O75354 484 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 GASTP01350 101 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 PRPS1L1P21108 318 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 LHCGRP22888 699 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 GGT2P36268 569 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 ITGA1P56199 1179 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 COX10Q12887 443 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 ZC3H12BQ5HYM0 836 aaKnown RBP9.46□□□□□ -0.89
SF3B2-206ENST00000528302 PNCKQ6P2M8 343 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 CRTC1Q6UUV9 634 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 CMTM8Q8IZV2 173 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 SYT14Q8NB59 555 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 MINDY2Q8NBR6 621 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 SORCS1Q8WY21 1168 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 CMTM7Q96FZ5 175 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 PDLIM5Q96HC4 596 aaKnown RBP9.46□□□□□ -0.89
SF3B2-206ENST00000528302 SERINC2Q96SA4 455 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 CLSTN3Q9BQT9 956 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 COQ3Q9NZJ6 369 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 FAM25EA8MYX2 175 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 RTCAO00442 366 aaKnown RBP9.46□□□□□ -0.89
SF3B2-206ENST00000528302 HOXC11O43248 304 aaPredicted RBP9.46□□□□□ -0.89
SF3B2-206ENST00000528302 CA12O43570 354 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 OR10H3O60404 316 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 TMCC2O75069 709 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 GCM2O75603 506 aaPredicted RBP9.46□□□□□ -0.89
SF3B2-206ENST00000528302 B3GALNT1O75752 331 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 CDRT1O95170 752 aa9.46□□□□□ -0.89
SF3B2-206ENST00000528302 HNRNPFP52597 415 aaKnown RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms