RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.97□□□□□ -0.65
SPIDR-211ENST00000519401 PIF1Q9H611 641 aa10.97□□□□□ -0.65
SPIDR-211ENST00000519401 RNF146Q9NTX7 359 aa10.97□□□□□ -0.65
SPIDR-211ENST00000519401 UFSP2Q9NUQ7 469 aa10.97□□□□□ -0.65
SPIDR-211ENST00000519401 IMP3Q9NV31 184 aaKnown RBP10.97□□□□□ -0.65
SPIDR-211ENST00000519401 GPATCH2LQ9NWQ4 482 aa10.97□□□□□ -0.65
SPIDR-211ENST00000519401 SPHK1Q9NYA1 384 aa10.97□□□□□ -0.65
SPIDR-211ENST00000519401 DUX4Q9UBX2 424 aa10.97□□□□□ -0.65
SPIDR-211ENST00000519401 PRAMEF33A0A0G2JMD5 474 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 LOC390937A0A1W2PQ73 354 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 RAD1O60671 282 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 PRAMEF10O60809 474 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 EIF3GO75821 320 aaKnown RBP eCLIP10.96□□□□□ -0.65
SPIDR-211ENST00000519401 CBX7O95931 251 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 FHP07954 510 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 CCND3P30281 292 aaPredicted RBP10.96□□□□□ -0.65
SPIDR-211ENST00000519401 PREPP48147 710 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 DIO3P55073 304 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 MTPNP58546 118 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 TEAD4Q15561 434 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 SNAPC1Q16533 368 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 EIF2S3LQ2VIR3 472 aaKnown RBP10.96□□□□□ -0.65
SPIDR-211ENST00000519401 ZNF792Q3KQV3 632 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 ATP6AP1LQ52LC2 224 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 SCYL2Q6P3W7 929 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 KIAA0907Q7Z7F0 614 aaPredicted RBP10.96□□□□□ -0.65
SPIDR-211ENST00000519401 MFSD6LQ8IWD5 586 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 ADGRG2Q8IZP9 1017 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 C12orf45Q8N5I9 185 aaPredicted RBP10.96□□□□□ -0.65
SPIDR-211ENST00000519401 IL17RCQ8NAC3 791 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 TMEM145Q8NBT3 493 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 OR5B17Q8NGF7 314 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 ART5Q96L15 291 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 TEX37Q96LM6 180 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 SLC38A3Q99624 504 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 SIK2Q9H0K1 926 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 TUBB1Q9H4B7 451 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 SPATA6Q9NWH7 488 aaPredicted RBP10.96□□□□□ -0.65
SPIDR-211ENST00000519401 MYEF2Q9P2K5 600 aaKnown RBP10.96□□□□□ -0.65
SPIDR-211ENST00000519401 ZNF222Q9UK12 451 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 ING1Q9UK53 422 aaPredicted RBP10.96□□□□□ -0.65
SPIDR-211ENST00000519401 USP3Q9Y6I4 520 aa10.96□□□□□ -0.65
SPIDR-211ENST00000519401 FAM74A7A6NL05 159 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 EFCAB7A8K855 629 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 FAM220BPB1ANY3 271 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 HPGDSO60760 199 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 CREG1O75629 220 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 GJB1P08034 283 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 STSP08842 583 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 CD19P15391 556 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 ATP5C1P36542 298 aaKnown RBP10.96□□□□□ -0.66
SPIDR-211ENST00000519401 MMP12P39900 470 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 CASP2P42575 452 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 RAG2P55895 527 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 UFM1P61960 85 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 PLIN5Q00G26 463 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 ST3GAL4Q11206 333 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 CAMK2GQ13555 558 aaPredicted RBP10.96□□□□□ -0.66
SPIDR-211ENST00000519401 CSHL1Q14406 222 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 FAM74A3Q4VXF1 159 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 PLA1AQ53H76 456 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 XKR7Q5GH72 579 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 FAM180BQ6P0A1 224 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 PKN3Q6P5Z2 889 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 NOTUMQ6P988 496 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 ATRAIDQ6UW56 229 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 FAM198BQ6UWH4 519 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 KDELC2Q7Z4H8 507 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 ZDHHC21Q8IVQ6 265 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 NAXDQ8IW45 347 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 PLA2G15Q8NCC3 412 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 C2CD4AQ8NCU7 369 aaPredicted RBP10.96□□□□□ -0.66
SPIDR-211ENST00000519401 TRPV1Q8NER1 839 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 CHST13Q8NET6 341 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 ATP6V1C2Q8NEY4 427 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 OR2T11Q8NH01 316 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 SCARB1Q8WTV0 552 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 LRRN4Q8WUT4 740 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 PCNPQ8WW12 178 aaKnown RBP10.96□□□□□ -0.66
SPIDR-211ENST00000519401 DEFB118Q96PH6 123 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 PDCD2LQ9BRP1 358 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 SNTG1Q9NSN8 517 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 VNN3Q9NY84 501 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 UTS2RQ9UKP6 389 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 IKZF3Q9UKT9 509 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 ZNF490Q9ULM2 529 aaPredicted RBP10.96□□□□□ -0.66
SPIDR-211ENST00000519401 NEUROG3Q9Y4Z2 214 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 DOCK5Q9H7D0 1870 aa10.96□□□□□ -0.66
SPIDR-211ENST00000519401 DNAJC25-GNG10A0A024R161 153 aa10.95□□□□□ -0.66
SPIDR-211ENST00000519401 D6RAR5 112 aa10.95□□□□□ -0.66
SPIDR-211ENST00000519401 CDC7O00311 574 aa10.95□□□□□ -0.66
SPIDR-211ENST00000519401 PSMD3O43242 534 aa10.95□□□□□ -0.66
SPIDR-211ENST00000519401 LZTS3O60299 673 aaPredicted RBP10.95□□□□□ -0.66
SPIDR-211ENST00000519401 CYP17A1P05093 508 aa10.95□□□□□ -0.66
SPIDR-211ENST00000519401 PIPP12273 146 aaPredicted RBP10.95□□□□□ -0.66
SPIDR-211ENST00000519401 NFKB1P19838 968 aa10.95□□□□□ -0.66
SPIDR-211ENST00000519401 ITPKAP23677 461 aa10.95□□□□□ -0.66
SPIDR-211ENST00000519401 EIF2S3P41091 472 aaKnown RBP10.95□□□□□ -0.66
SPIDR-211ENST00000519401 CRYBB2P43320 205 aa10.95□□□□□ -0.66
SPIDR-211ENST00000519401 ASPAP45381 313 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms