RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 KCTD5Q9NXV2 234 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 GPRC5BQ9NZH0 403 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 PCOLCE2Q9UKZ9 415 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 EXO1Q9UQ84 846 aaKnown RBP13.03□□□□□ -0.32
PABPC1-208ENST00000519004 TNFSF13BQ9Y275 285 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 PADI2Q9Y2J8 665 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 CCL27Q9Y4X3 112 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 NPEPPSL1A6NEC2 478 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 SSX5O60225 188 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 NDUFS6O75380 124 aaKnown RBP13.03□□□□□ -0.32
PABPC1-208ENST00000519004 CCNB2O95067 398 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 TGM6O95932 706 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 C1QCP02747 245 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 HBQ1P09105 142 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 HAPLN1P10915 354 aaPredicted RBP13.03□□□□□ -0.32
PABPC1-208ENST00000519004 SMPD1P17405 629 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 PTPN6P29350 595 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 SDC2P34741 201 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 CACNB2Q08289 660 aaPredicted RBP13.03□□□□□ -0.32
PABPC1-208ENST00000519004 IL18Q14116 193 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 ABRAXAS2Q15018 415 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 MPEG1Q2M385 716 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 ZNF57Q68EA5 555 aaPredicted RBP13.03□□□□□ -0.32
PABPC1-208ENST00000519004 ZNF730Q6ZMV8 503 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 C1orf52Q8N6N3 182 aaKnown RBP13.03□□□□□ -0.32
PABPC1-208ENST00000519004 METTL6Q8TCB7 284 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 POF1BQ8WVV4 589 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 C7orf34Q96L11 122 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 SLC2A13Q96QE2 648 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 PIP5K1AQ99755 562 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 INPP5KQ9BT40 448 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 KATNB1Q9BVA0 655 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 SARGQ9BW04 601 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 GPR63Q9BZJ6 419 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 BCL2L14Q9BZR8 327 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 ZNF436Q9C0F3 470 aaPredicted RBP13.03□□□□□ -0.32
PABPC1-208ENST00000519004 COMMD3Q9UBI1 195 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 RPS6KA6Q9UK32 745 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 PPIEQ9UNP9 301 aaKnown RBP13.03□□□□□ -0.32
PABPC1-208ENST00000519004 GINS2Q9Y248 185 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 SBF1O95248 1867 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 ZNF236Q9UL36 1845 aa13.03□□□□□ -0.32
PABPC1-208ENST00000519004 TP53BP1Q12888 1972 aaPredicted RBP13.02□□□□□ -0.32
PABPC1-208ENST00000519004 TRAV6A0A075B6T7 132 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 IGKV6D-21A0A0A0MT36 114 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 SH3D21A4FU49 640 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 G3V3Q6 166 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 SNAPINO95295 136 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 B3GALT4O96024 378 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 LPLP06858 475 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 GJB1P08034 283 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 SYPP08247 313 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 NMBP08949 121 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 PIPP12273 146 aaPredicted RBP13.02□□□□□ -0.32
PABPC1-208ENST00000519004 INPP1P49441 399 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 VSX2P58304 361 aaPredicted RBP13.02□□□□□ -0.32
PABPC1-208ENST00000519004 ABRQ12979 859 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 LIPKQ5VXJ0 399 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 MSANTD2Q6P1R3 559 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 PAQR3Q6TCH7 311 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 METAP1DQ6UB28 335 aaPredicted RBP13.02□□□□□ -0.32
PABPC1-208ENST00000519004 CBLL1Q75N03 491 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 SP8Q8IXZ3 490 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 BVESQ8NE79 360 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 OR9Q1Q8NGQ5 310 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 OR6B3Q8NGW1 331 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 UROC1Q96N76 676 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 NIPSNAP1Q9BPW8 284 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 MINDY3Q9H8M7 445 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 ZNF408Q9H9D4 720 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 DLL4Q9NR61 685 aa13.02□□□□□ -0.32
PABPC1-208ENST00000519004 J3KR12 359 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 PPEF2O14830 753 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 ODC1P11926 461 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 KDELR2P33947 212 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 CDKN2CP42773 168 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 HK3P52790 923 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 AIF1P55008 147 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 CAV3P56539 151 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 WNT3AP56704 352 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 CYP4F8P98187 520 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 ZNF33AQ06730 810 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 TTLL9Q3SXZ7 439 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 PDE12Q6L8Q7 609 aaKnown RBP13.02□□□□□ -0.33
PABPC1-208ENST00000519004 USP45Q70EL2 814 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 TMEM163Q8TC26 289 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 SLC38A2Q96QD8 506 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 AARSD1Q9BTE6 412 aaKnown RBP13.02□□□□□ -0.33
PABPC1-208ENST00000519004 TINAGL1Q9GZM7 467 aaPredicted RBP13.02□□□□□ -0.33
PABPC1-208ENST00000519004 KCNH6Q9H252 994 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 OR51J1Q9H342 316 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 NRBP2Q9NSY0 501 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 EMC3Q9P0I2 261 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 CTSFQ9UBX1 484 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 FBXW11Q9UKB1 542 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 KCNK7Q9Y2U2 307 aa13.02□□□□□ -0.33
PABPC1-208ENST00000519004 MEIKINA0A087WXM9 373 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 MPTX1A8MV57 137 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 GABRDO14764 452 aa13.01□□□□□ -0.33
PABPC1-208ENST00000519004 IQCF3P0C7M6 154 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms