RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 MAGED4Q96JG8 741 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 NECTIN4Q96NY8 510 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 ZNF607Q96SK3 696 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 TIMP4Q99727 224 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 SLC39A3Q9BRY0 314 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 TRMOQ9BU70 441 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 ZSCAN5AQ9BUG6 496 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 DUSP26Q9BV47 211 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 C1QTNF7Q9BXJ2 289 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 SLC2A11Q9BYW1 496 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 SDCBP2Q9H190 292 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 VCX2Q9H322 139 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 CLSTN2Q9H4D0 955 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 C10orf88Q9H8K7 445 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 WDR76Q9H967 626 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 MLXIPLQ9NP71 852 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 OSER1Q9NX31 292 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 SMPD3Q9NY59 655 aaPredicted RBP2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 ATXN10Q9UBB4 475 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 NARFQ9UHQ1 456 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 BCAP29Q9UHQ4 241 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 MRPS2Q9Y399 296 aaKnown RBP2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 TESMINQ9Y4I5 508 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 ASB3Q9Y575 518 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 TRIOO75962 3097 aa2.55□□□□□ -2
SCARNA17.1-201ENST00000516211 TJP1Q07157 1748 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 COL4A3Q01955 1670 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 CHD7Q9P2D1 2997 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 CD163L1Q9NR16 1453 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 IL16Q14005 1332 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 TRBV5-3A0A0A0MS03 114 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 FEZF1A0PJY2 475 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 XKRY2A2RUG3 117 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 ERICH4A6NGS2 130 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 PRR32B1ATL7 298 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 PRSS46E5RG02 174 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 L7N2F9 121 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 PRRG1O14668 218 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 CTAGE5O15320 804 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 HSPA12AO43301 675 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 RNASEH1O60930 286 aaKnown RBP2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 CSO75390 466 aaKnown RBP2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 ERLIN1O75477 346 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 CLN5O75503 358 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 ATP6AP2O75787 350 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 ITGB3P05106 788 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 PROS1P07225 676 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 APRTP07741 180 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 FGF2P09038 288 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 SMIM18P0DKX4 95 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 KRT3P12035 628 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 CCDC130P13994 396 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 MYOGP15173 224 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 GNSP15586 552 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 NAGAP17050 411 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 FUT1P19526 365 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 ITGB7P26010 798 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 HTR2AP28223 471 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 ALDH4A1P30038 563 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 CHI3L1P36222 383 aaPredicted RBP2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 ALDH3B1P43353 468 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 RARRES1P49788 294 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 GEMP55040 296 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 MLLT10P55197 1068 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 ZP1P60852 638 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 ACTR3P61158 418 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 MAT1AQ00266 395 aaKnown RBP2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 ID2Q02363 134 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 CRYZQ08257 329 aaKnown RBP2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 TUBA3CQ13748 450 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 RCN1Q15293 331 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 STX1AQ16623 288 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 ODF4Q2M2E3 257 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 CCDC57Q2TAC2 916 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 POM121L1PQ3SYA9 428 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 AMZ1Q400G9 498 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 TDRD12Q587J7 1177 aaKnown RBP2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 Q5PR19 223 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 FAM69BQ5VUD6 431 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 OTUD1Q5VV17 481 aaPredicted RBP2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 HIST2H2AA3Q6FI13 130 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 FAM166AQ6J272 317 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 TTC27Q6P3X3 843 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 ARHGAP11AQ6P4F7 1023 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 CTR9Q6PD62 1173 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 TUBA3EQ6PEY2 450 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 SIGLEC15Q6ZMC9 328 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 CCNI2Q6ZMN8 369 aaPredicted RBP2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 SLC16A12Q6ZSM3 486 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 TMEM26Q6ZUK4 368 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 TTLL10Q6ZVT0 673 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 RHOUQ7L0Q8 258 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 AMIGO2Q86SJ2 522 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 CUZD1Q86UP6 607 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 VPS36Q86VN1 386 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 NBPF5PQ86XG9 351 aaPredicted RBP2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 ZDHHC21Q8IVQ6 265 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 STHQ8IWL8 128 aa2.54□□□□□ -2
SCARNA17.1-201ENST00000516211 LGI2Q8N0V4 545 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms