RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 IL1RNP18510 177 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 MATN1P21941 496 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 IDH3AP50213 366 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 EMX2Q04743 252 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 EIF3IQ13347 325 aaKnown RBP4.92□□□□□ -1.62
PHF3-210ENST00000509876 PDCD4Q53EL6 469 aaKnown RBP4.92□□□□□ -1.62
PHF3-210ENST00000509876 CYP2R1Q6VVX0 501 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 ANKRD46Q86W74 232 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 TICAM1Q8IUC6 712 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 NAXDQ8IW45 347 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 SPATA9Q9BWV2 254 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 CDADC1Q9BWV3 514 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 SPTY2D1-AS1A0A0U1RR47 76 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 ELOVL7A1L3X0 281 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 H7C0S8 307 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 PRAMEF2O60811 474 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 KCNK5O95279 499 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 IGHA2P01877 340 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 SLC35E2BP0CK96 405 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 GIMD1P0DJR0 217 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 NR2C1P13056 603 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 MAGP20916 626 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 UQCRC2P22695 453 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 PDHA2P29803 388 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 VASPP50552 380 aaPredicted RBP4.92□□□□□ -1.62
PHF3-210ENST00000509876 ADARP55265 1226 aaKnown RBP4.92□□□□□ -1.62
PHF3-210ENST00000509876 CDC42P60953 191 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 SCARB2Q14108 478 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 PCBP2Q15366 365 aaKnown RBP eCLIP4.92□□□□□ -1.625e-7■■■■■ 29.3
PHF3-210ENST00000509876 TRIP6Q15654 476 aaKnown RBP4.92□□□□□ -1.62
PHF3-210ENST00000509876 IKBIPQ70UQ0 350 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 PACS2Q86VP3 889 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 SETD9Q8NE22 299 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 OR5P2Q8WZ92 322 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 DACT3Q96B18 629 aaPredicted RBP4.92□□□□□ -1.62
PHF3-210ENST00000509876 FGF22Q9HCT0 170 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 MKKSQ9NPJ1 570 aaPredicted RBP4.92□□□□□ -1.62
PHF3-210ENST00000509876 EBF1Q9UH73 591 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 SCN10AQ9Y5Y9 1956 aa4.92□□□□□ -1.62
PHF3-210ENST00000509876 TSPAN11A1L157 253 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 EMC8O43402 210 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 TNFSF14O43557 240 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 SIGLEC6O43699 453 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 PCDHGA12O60330 932 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 SCELO95171 688 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 AK1P00568 194 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 CHRNGP07510 517 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 CHRNB1P11230 501 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 COL9A1P20849 921 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 RYKP34925 604 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 CCT3P49368 545 aaKnown RBP4.91□□□□□ -1.62
PHF3-210ENST00000509876 SLC18A1P54219 525 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 OR4D1Q15615 310 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 KLHL26Q53HC5 615 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 TNFAIP8L2Q6P589 184 aaPredicted RBP4.91□□□□□ -1.62
PHF3-210ENST00000509876 CNTN4Q8IWV2 1026 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 PIANPQ8IYJ0 282 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 OR2L5Q8NG80 312 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 OR56A3Q8NH54 315 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 HUS1BQ8NHY5 278 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 TMEM234Q8WY98 164 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 TANKQ92844 425 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 ZNF778Q96MU6 729 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 IP6K3Q96PC2 410 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 LRRC3Q9BY71 257 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 DUSP15Q9H1R2 295 aaPredicted RBP4.91□□□□□ -1.62
PHF3-210ENST00000509876 EPB41L4BQ9H329 900 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 BRF2Q9HAW0 419 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 PADI1Q9ULC6 663 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 MAN2B2Q9Y2E5 1009 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 CSNK1G3Q9Y6M4 447 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 FADS2P1A8MWK0 482 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 IL3P08700 152 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 AHRP35869 848 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 ACTR3P61158 418 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.91□□□□□ -1.62
PHF3-210ENST00000509876 GPR68Q15743 365 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 ZFAND4Q86XD8 727 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 KMT5CQ86Y97 462 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 ZDHHC13Q8IUH4 622 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 PIGXQ8TBF5 258 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 RHBDF1Q96CC6 855 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 C9orf16Q9BUW7 83 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 TEX101Q9BY14 249 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 C12orf65Q9H3J6 166 aaKnown RBP4.91□□□□□ -1.62
PHF3-210ENST00000509876 C3orf18Q9UK00 162 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 PRPF19Q9UMS4 504 aaKnown RBP4.91□□□□□ -1.62
PHF3-210ENST00000509876 NFS1Q9Y697 457 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 OR5K3A6NET4 321 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 SGK494L7N484 410 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 GALR2O43603 387 aaPredicted RBP4.91□□□□□ -1.62
PHF3-210ENST00000509876 CLEC3AO75596 197 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 UBOX5O94941 541 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 SAGP10523 405 aaPredicted RBP4.91□□□□□ -1.62
PHF3-210ENST00000509876 NME1P15531 152 aaKnown RBP4.91□□□□□ -1.62
PHF3-210ENST00000509876 EEF1A2Q05639 463 aaKnown RBP4.91□□□□□ -1.62
PHF3-210ENST00000509876 KLF10Q13118 480 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 TRA2AQ13595 282 aaKnown RBP eCLIP4.91□□□□□ -1.62
PHF3-210ENST00000509876 VN1R5Q7Z5H4 357 aa4.91□□□□□ -1.62
PHF3-210ENST00000509876 TLCD1Q96CP7 247 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms