RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 P3H2Q8IVL5 708 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 CCDC103Q8IW40 242 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 RHOXF1Q8NHV9 184 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 ARRDC3Q96B67 414 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 NIPSNAP1Q9BPW8 284 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 COPS4Q9BT78 406 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 WDR12Q9GZL7 423 aaKnown RBP11.8□□□□□ -0.52
PTCD2-204ENST00000486995 TRIM39Q9HCM9 518 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 ITM2CQ9NQX7 267 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 THSD1Q9NS62 852 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 PLCXD1Q9NUJ7 323 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 SAGE1Q9NXZ1 904 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 TAS2R9Q9NYW1 312 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 SPASTQ9UBP0 616 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 PSORS1C1Q9UIG5 152 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 PCDHGA2Q9Y5H1 932 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 CLDN24A6NM45 220 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 ZBBXA8MT70 800 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 PLK4O00444 970 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 POP7O75817 140 aaKnown RBP11.8□□□□□ -0.52
PTCD2-204ENST00000486995 TGFBR1P36897 503 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 GPR1P46091 355 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 CDH12P55289 794 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 ST8SIA6P61647 398 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 CDK6Q00534 326 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 SPIBQ01892 262 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 NFE2L1Q14494 772 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 EXOC3L2Q2M3D2 409 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 CRB2Q5IJ48 1285 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 TMEM236Q5W0B7 351 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 RAET1GQ6H3X3 334 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 VN1R5Q7Z5H4 357 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 MMP21Q8N119 569 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 MFSD4AQ8N468 514 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 OXR1Q8N573 874 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 OR6Q1Q8NGQ2 317 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 NXPE3Q969Y0 559 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 NUS1Q96E22 293 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 LINC00615Q96LM1 132 aaPredicted RBP11.8□□□□□ -0.52
PTCD2-204ENST00000486995 ALPK1Q96QP1 1244 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 ZDHHC5Q9C0B5 715 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 ZCCHC2Q9C0B9 1178 aaKnown RBP11.8□□□□□ -0.52
PTCD2-204ENST00000486995 FBXO8Q9NRD0 319 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 DOLKQ9UPQ8 538 aa11.8□□□□□ -0.52
PTCD2-204ENST00000486995 MTCL1Q9Y4B5 1905 aaKnown RBP11.79□□□□□ -0.52
PTCD2-204ENST00000486995 PRRT4C9JH25 899 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 BOLA2-SMG1P6H3BVE0 249 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 J3KTA2 159 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 SLC9A3R1O14745 358 aaPredicted RBP11.79□□□□□ -0.52
PTCD2-204ENST00000486995 MMP20O60882 483 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 PRNPP04156 253 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 ADH5P11766 374 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 C6P13671 934 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 ANXA8P13928 327 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 EPCAMP16422 314 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 CEBPBP17676 345 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 FUT4P22083 530 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 LIPAP38571 399 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 RPL3P39023 403 aaKnown RBP11.79□□□□□ -0.52
PTCD2-204ENST00000486995 SLC19A1P41440 591 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 PIK3CBP42338 1070 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 BCAP31P51572 246 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 IFITM3Q01628 133 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 CYP2A13Q16696 494 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 TRIM40Q6P9F5 258 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 LGI4Q8N135 537 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 DNAJC22Q8N4W6 341 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 PHF10Q8WUB8 498 aaKnown RBP11.79□□□□□ -0.52
PTCD2-204ENST00000486995 S100ZQ8WXG8 99 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 PROX1Q92786 737 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 GGHQ92820 318 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 IL17FQ96PD4 163 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 SORBS1Q9BX66 1292 aaKnown RBP11.79□□□□□ -0.52
PTCD2-204ENST00000486995 SLC6A16Q9GZN6 736 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 SLIRPQ9GZT3 109 aaKnown RBP11.79□□□□□ -0.52
PTCD2-204ENST00000486995 AMBNQ9NP70 447 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 CCDC177Q9NQR7 707 aaPredicted RBP11.79□□□□□ -0.52
PTCD2-204ENST00000486995 FKBP14Q9NWM8 211 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 SELENONQ9NZV5 590 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 PCYT1BQ9Y5K3 369 aaPredicted RBP11.79□□□□□ -0.52
PTCD2-204ENST00000486995 PRAMEF33A0A0G2JMD5 474 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 C17orf113A0A1B0GUU1 675 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 A0A1W2PRB8 838 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 M0R082 166 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 PRAMEF10O60809 474 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 IL3P08700 152 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 BMP4P12644 408 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 GABRB1P18505 474 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 ITGB7P26010 798 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 CHI3L1P36222 383 aaPredicted RBP11.79□□□□□ -0.52
PTCD2-204ENST00000486995 PCBP3P57721 371 aaKnown RBP11.79□□□□□ -0.52
PTCD2-204ENST00000486995 OXA1LQ15070 435 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 C9orf64Q5T6V5 341 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 ZNF697Q5TEC3 545 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 NIPAL1Q6NVV3 410 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 FAM83HQ6ZRV2 1179 aaPredicted RBP11.79□□□□□ -0.52
PTCD2-204ENST00000486995 ZNF765Q7L2R6 523 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 ADCK1Q86TW2 530 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 WFIKKN2Q8TEU8 576 aa11.79□□□□□ -0.52
PTCD2-204ENST00000486995 POF1BQ8WVV4 589 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms