RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 C4orf17Q53FE4 359 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 FHL5Q5TD97 284 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 VWA5B1Q5TIE3 1220 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 KANK2Q63ZY3 851 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 RNF165Q6ZSG1 346 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 SHISA6Q6ZSJ9 500 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 CHSY3Q70JA7 882 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 PPP1R32Q7Z5V6 425 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 MRGPREQ86SM8 312 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 TREML1Q86YW5 311 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 CARFQ8N187 725 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 CISD2Q8N5K1 135 aaKnown RBP8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 METTL27Q8N6F8 245 aaPredicted RBP8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 GALNT11Q8NCW6 608 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 SNRNP40Q96DI7 357 aaKnown RBP8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 MAGEB10Q96LZ2 347 aaPredicted RBP8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 ZNF382Q96SR6 550 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 SLC30A3Q99726 388 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 NUF2Q9BZD4 464 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 UNKQ9C0B0 810 aaKnown RBP8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 ZNF385DQ9H6B1 395 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 FANCEQ9HB96 536 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 ARMCX1Q9P291 453 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 PLEKHB1Q9UF11 243 aaPredicted RBP8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 NTNG1Q9Y2I2 539 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 ZNF451Q9Y4E5 1061 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 FLNCQ14315 2725 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 MDC1Q14676 2089 aaKnown RBP8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 A0A0J9YY10 115 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 KLHL33A6NCF5 533 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 PABPN1LA6NDY0 278 aaKnown RBP8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 LIN7AO14910 233 aaPredicted RBP8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 GPC4O75487 556 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 CRCPO75575 148 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 MSL3P1P0C860 447 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 UROSP10746 265 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 COX4I1P13073 169 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 MAGP20916 626 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 AOAHP28039 575 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 PSMB5P28074 263 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 MRPL19P49406 292 aaKnown RBP8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 HNMTP50135 292 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 RAP1GDS1P52306 607 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 AP1S2P56377 157 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 BTKQ06187 659 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 HSPA14Q0VDF9 509 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 RPA4Q13156 261 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 SQLEQ14534 574 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 NR6A1Q15406 480 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 SNCBQ16143 134 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 C6orf163Q5TEZ5 329 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 FCRL6Q6DN72 434 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 RHBDD2Q6NTF9 364 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 MRPL14Q6P1L8 145 aaKnown RBP8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 SBSNQ6UWP8 590 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 GPRIN3Q6ZVF9 776 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 SPATA19Q7Z5L4 167 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 TBC1D21Q8IYX1 336 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 SHISA5Q8N114 240 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 KIF2BQ8N4N8 673 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 OR5K2Q8NHB8 316 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 PRR7Q8TB68 274 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 AGAP11Q8TF27 550 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 ASZ1Q8WWH4 475 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 EXT2Q93063 718 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 TCTN2Q96GX1 697 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 OR52B2Q96RD2 323 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 SMAD5Q99717 465 aaKnown RBP8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 CADM1Q9BY67 442 aaKnown RBP8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 ZNF552Q9H707 407 aaPredicted RBP8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 SYNPO2LQ9H987 977 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 MID1IP1Q9NPA3 183 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 SLAMF7Q9NQ25 335 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 ASF1BQ9NVP2 202 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 P4HTMQ9NXG6 502 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 GPR83Q9NYM4 423 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 GALPQ9UBC7 116 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 PTBP2Q9UKA9 531 aaKnown RBP8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 PCTPQ9UKL6 214 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 SEC16AO15027 2179 aa8.94□□□□□ -0.98
TMEM39A-208ENST00000486159 C9J4A7 227 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 E9PBE3 544 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 E2F3O00716 465 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 UBFD1O14562 309 aaKnown RBP8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 UBDO15205 165 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 ZSCAN9O15535 394 aaPredicted RBP8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 KLHL41O60662 606 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 DPM1O60762 260 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 ATP6V1G2O95670 118 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 OTCP00480 354 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 AGXTP21549 392 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 ALAS2P22557 587 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 CCND1P24385 295 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 PIK3R1P27986 724 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 EPHA3P29320 983 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 PKLRP30613 574 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 SHMT2P34897 504 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 PGM1P36871 562 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 OR1D4P47884 311 aa8.93□□□□□ -0.98
TMEM39A-208ENST00000486159 DCDP81605 110 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms