RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 ALBP02768 609 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 ASGR2P07307 311 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 ABCB1P08183 1280 aaPredicted RBP20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 CDK4P11802 303 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 NELFEP18615 380 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 AKT2P31751 481 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 ALDH3A2P51648 485 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 YPEL5P62699 121 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 PTOV1Q86YD1 416 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 SYNPOQ8N3V7 929 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 MRPS30Q9NP92 439 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 H0Y8X5 98 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 UPK1AO00322 258 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 CAPN5O15484 640 aaPredicted RBP20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 CLEC3AO75596 197 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 NDUFS1P28331 727 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 VEZF1Q14119 521 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 ADCK2Q7Z695 626 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 TMBIM1Q969X1 311 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 RGMAQ96B86 450 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 TMIGD2Q96BF3 282 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 CHST8Q9H2A9 424 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 TMEM184CQ9NVA4 438 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 TMEM9Q9P0T7 183 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 TMEM265A0A087WTH1 108 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 IGKV1-8A0A0C4DH67 115 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 A0A1B0GVG6 124 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 NDUFS4O43181 175 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 LCMT2O60294 686 aaKnown RBP20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 C6orf47O95873 294 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 CST1P01037 141 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 GSTM5P46439 218 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 HLCSP50747 726 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 GAB1Q13480 694 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 TPRG1LQ5T0D9 272 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 CROCCP3Q8IVE0 287 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 MAGEE2Q8TD90 523 aaPredicted RBP20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 HMGB4Q8WW32 186 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 MIEF1Q9NQG6 463 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 USP36Q9P275 1121 aaKnown RBP20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 TBC1D29Q9UFV1 150 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 RPS6KA6Q9UK32 745 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 ADAM29Q9UKF5 820 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 HS3ST3A1Q9Y663 406 aa20.75■□□□□ 0.91
PDLIM2-216ENST00000464275 TBX19O60806 448 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 SEMA4FO95754 770 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 GRK3P35626 688 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 MAPK12P53778 367 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 CDH15P55291 814 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 HBA1P69905 142 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 DAG1Q14118 895 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 RGNQ15493 299 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 MPEG1Q2M385 716 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 TMEM31Q5JXX7 168 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 CHRDL2Q6WN34 429 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 RD3Q7Z3Z2 195 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 NUDT13Q86X67 352 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 NATD1Q8N6N6 113 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 GAB3Q8WWW8 586 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 TSACCQ96A04 125 aaPredicted RBP20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 CIDECQ96AQ7 238 aaPredicted RBP20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 SDCCAG3Q96C92 435 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 ISOC1Q96CN7 298 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 DOK1Q99704 481 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 PHF7Q9BWX1 381 aaPredicted RBP20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 PRO3102Q9H379 93 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 POLMQ9NP87 494 aaPredicted RBP20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 PCOLCE2Q9UKZ9 415 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 PRAMEF33A0A0G2JMD5 474 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 TOR1BO14657 336 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 DDX5P17844 614 aaKnown RBP20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 KDELR2P33947 212 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 ARSFP54793 590 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 TMEM214Q6NUQ4 689 aaKnown RBP20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 CREB3L4Q8TEY5 395 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 TM4SF18Q96CE8 201 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 NPLQ9BXD5 320 aaPredicted RBP20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 EBF1Q9UH73 591 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 AP1M2Q9Y6Q5 423 aa20.74■□□□□ 0.91
PDLIM2-216ENST00000464275 ARHGEF17Q96PE2 2063 aaPredicted RBP20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 A0A1W2PRB8 838 aa20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 C10orf142B7Z368 130 aa20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 RTCAO00442 366 aaKnown RBP20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 CD72P21854 359 aa20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 AK4P27144 223 aaPredicted RBP20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 GSTM2P28161 218 aa20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 SHMT2P34897 504 aa20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 CLVS1Q8IUQ0 354 aaPredicted RBP20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 ADHFE1Q8IWW8 467 aa20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 ZCCHC7Q8N3Z6 543 aaKnown RBP20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 SVOPLQ8N434 492 aa20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 OR2L3Q8NG85 312 aa20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 B4GALNT2Q8NHY0 566 aa20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 FBXL20Q96IG2 436 aa20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 SLC35A5Q9BS91 424 aa20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 SLC6A20Q9NP91 592 aa20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 TAS2R9Q9NYW1 312 aa20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 NDRG2Q9UN36 371 aaKnown RBP20.73■□□□□ 0.91
PDLIM2-216ENST00000464275 GNGT2O14610 69 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms