RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 ETV4P43268 484 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 SSR2P43308 183 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 SERPINB4P48594 390 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 MTTPP55157 894 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 RPS13P62277 151 aaKnown RBP18.74■□□□□ 0.59
COL9A3-204ENST00000463487 COL28A1Q2UY09 1125 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 AP5B1Q2VPB7 878 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 DEPDC1Q5TB30 811 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 ABHD17CQ6PCB6 329 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 C19orf48Q6RUI8 117 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 PDSS2Q86YH6 399 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 AGAP11Q8TF27 550 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 SELENOMQ8WWX9 145 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 TLCD1Q96CP7 247 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 OR1F2PQ96R84 312 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 MECRQ9BV79 373 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 BRF2Q9HAW0 419 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 ACSS2Q9NR19 701 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 AHSPQ9NZD4 102 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 HCN3Q9P1Z3 774 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 SPACA6W5XKT8 324 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 DMXL2Q8TDJ6 3036 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 TMEM120BA0PK00 339 aa18.73■□□□□ 0.59
COL9A3-204ENST00000463487 CDC14CA4D256 554 aa18.73■□□□□ 0.59
COL9A3-204ENST00000463487 ZNF860A6NHJ4 632 aa18.73■□□□□ 0.59
COL9A3-204ENST00000463487 PEX12O00623 359 aa18.73■□□□□ 0.59
COL9A3-204ENST00000463487 PPP6CO00743 305 aa18.73■□□□□ 0.59
COL9A3-204ENST00000463487 ULK1O75385 1050 aa18.73■□□□□ 0.59
COL9A3-204ENST00000463487 RNH1P13489 461 aaKnown RBP18.73■□□□□ 0.59
COL9A3-204ENST00000463487 HSD3B1P14060 373 aa18.73■□□□□ 0.59
COL9A3-204ENST00000463487 HSD3B2P26439 372 aa18.73■□□□□ 0.59
COL9A3-204ENST00000463487 XCR1P46094 333 aa18.73■□□□□ 0.59
COL9A3-204ENST00000463487 SLC18A1P54219 525 aa18.73■□□□□ 0.59
COL9A3-204ENST00000463487 MAT1AQ00266 395 aaKnown RBP18.73■□□□□ 0.59
COL9A3-204ENST00000463487 SGO1Q5FBB7 561 aa18.73■□□□□ 0.59
COL9A3-204ENST00000463487 MFSD4BQ5TF39 518 aa18.73■□□□□ 0.59
COL9A3-204ENST00000463487 HHATQ5VTY9 493 aa18.73■□□□□ 0.59
COL9A3-204ENST00000463487 SPSB2Q99619 263 aa18.73■□□□□ 0.59
COL9A3-204ENST00000463487 GATA5Q9BWX5 397 aaPredicted RBP18.73■□□□□ 0.59
COL9A3-204ENST00000463487 OR51B5Q9H339 312 aa18.73■□□□□ 0.59
COL9A3-204ENST00000463487 PRORYQ9H606 182 aa18.73■□□□□ 0.59
COL9A3-204ENST00000463487 SOX17Q9H6I2 414 aaPredicted RBP18.73■□□□□ 0.59
COL9A3-204ENST00000463487 MRPS33Q9Y291 106 aaKnown RBP18.73■□□□□ 0.59
COL9A3-204ENST00000463487 AGPSO00116 658 aa18.72■□□□□ 0.59
COL9A3-204ENST00000463487 NKX2-8O15522 239 aa18.72■□□□□ 0.59
COL9A3-204ENST00000463487 SEMA3DO95025 777 aa18.72■□□□□ 0.59
COL9A3-204ENST00000463487 CHEK2O96017 543 aa18.72■□□□□ 0.59
COL9A3-204ENST00000463487 HEXBP07686 556 aa18.72■□□□□ 0.59
COL9A3-204ENST00000463487 OTX2P32243 289 aa18.72■□□□□ 0.59
COL9A3-204ENST00000463487 NEK2P51955 445 aa18.72■□□□□ 0.59
COL9A3-204ENST00000463487 KLC1Q07866 573 aa18.72■□□□□ 0.59
COL9A3-204ENST00000463487 CSTF3Q12996 717 aaKnown RBP18.72■□□□□ 0.59
COL9A3-204ENST00000463487 SYT16Q17RD7 645 aa18.72■□□□□ 0.59
COL9A3-204ENST00000463487 MINDY4Q4G0A6 757 aa18.72■□□□□ 0.59
COL9A3-204ENST00000463487 VWA2Q5GFL6 755 aa18.72■□□□□ 0.59
COL9A3-204ENST00000463487 GBP7Q8N8V2 638 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-204ENST00000463487 ANKRD42Q8N9B4 389 aa18.72■□□□□ 0.59
COL9A3-204ENST00000463487 TBC1D20Q96BZ9 403 aa18.72■□□□□ 0.59
COL9A3-204ENST00000463487 MTFMTQ96DP5 389 aaKnown RBP18.72■□□□□ 0.59
COL9A3-204ENST00000463487 ATP6V1G3Q96LB4 118 aa18.72■□□□□ 0.59
COL9A3-204ENST00000463487 C3orf18Q9UK00 162 aa18.72■□□□□ 0.59
COL9A3-204ENST00000463487 A0A0G2JN53 185 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 HMGB1P1B2RPK0 211 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-204ENST00000463487 MANBAO00462 879 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 CHST10O43529 356 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 SNUPNO95149 360 aaKnown RBP18.71■□□□□ 0.59
COL9A3-204ENST00000463487 BMP10O95393 424 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 ITGB2P05107 769 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 HIST1H1TP22492 207 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-204ENST00000463487 MMP11P24347 488 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 EMP2P54851 167 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 RHDQ02161 417 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 GALNT1Q10472 559 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-204ENST00000463487 IL10RAQ13651 578 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 OR4C11Q6IEV9 310 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 SHISA6Q6ZSJ9 500 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 PAGE2Q7Z2X7 111 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 ZC3H7AQ8IWR0 971 aaKnown RBP18.71■□□□□ 0.59
COL9A3-204ENST00000463487 PRSS58Q8IYP2 241 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 METTL21AQ8WXB1 218 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 PEX11GQ96HA9 241 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 QRFPRQ96P65 431 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 PAIP2Q9BPZ3 127 aaKnown RBP18.71■□□□□ 0.59
COL9A3-204ENST00000463487 ZNF225Q9UK10 706 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 MKL2Q9ULH7 1088 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 SLC12A4Q9UP95 1085 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 MAN2B2Q9Y2E5 1009 aa18.71■□□□□ 0.59
COL9A3-204ENST00000463487 A0A1B0GTL3 188 aa18.7■□□□□ 0.58
COL9A3-204ENST00000463487 ARHGAP10A1A4S6 786 aa18.7■□□□□ 0.58
COL9A3-204ENST00000463487 IDSB3KWA1 339 aa18.7■□□□□ 0.58
COL9A3-204ENST00000463487 CNOT3O75175 753 aaKnown RBP18.7■□□□□ 0.58
COL9A3-204ENST00000463487 SH3BGRLO75368 114 aa18.7■□□□□ 0.58
COL9A3-204ENST00000463487 TBX6O95947 436 aaPredicted RBP18.7■□□□□ 0.58
COL9A3-204ENST00000463487 PDYNP01213 254 aa18.7■□□□□ 0.58
COL9A3-204ENST00000463487 SERPINE1P05121 402 aa18.7■□□□□ 0.58
COL9A3-204ENST00000463487 FHP07954 510 aa18.7■□□□□ 0.58
COL9A3-204ENST00000463487 UROSP10746 265 aa18.7■□□□□ 0.58
COL9A3-204ENST00000463487 GRK2P25098 689 aa18.7■□□□□ 0.58
COL9A3-204ENST00000463487 RRADP55042 308 aa18.7■□□□□ 0.58
COL9A3-204ENST00000463487 TUBB8Q3ZCM7 444 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 653.9 ms