RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 FAM129AQ9BZQ8 928 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 NEUROD4Q9HD90 331 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 CRIM1Q9NZV1 1036 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 WHRNQ9P202 907 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 NAALAD2Q9Y3Q0 740 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 A0A0G2JNJ9 132 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 KIAA1324LA8MWY0 1029 aaPredicted RBP16.06■□□□□ 0.16
TOP3A-202ENST00000461127 DNALI1O14645 258 aaPredicted RBP16.06■□□□□ 0.16
TOP3A-202ENST00000461127 PFDN6O15212 129 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 CTIFO43310 598 aaKnown RBP16.06■□□□□ 0.16
TOP3A-202ENST00000461127 SYF2O95926 243 aaKnown RBP16.06■□□□□ 0.16
TOP3A-202ENST00000461127 TUBBP07437 444 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 GLI4P10075 376 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 UQCRC1P31930 480 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 PPIAP62937 165 aaKnown RBP16.06■□□□□ 0.16
TOP3A-202ENST00000461127 CUL1Q13616 776 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 SNTB1Q13884 538 aaKnown RBP16.06■□□□□ 0.16
TOP3A-202ENST00000461127 GBX1Q14549 363 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 HERC3Q15034 1050 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 KLHL38Q2WGJ6 581 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 FLYWCH1Q4VC44 716 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 CTSL3PQ5NE16 218 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 RGS9BPQ6ZS82 235 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 PRIMA1Q86XR5 153 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 ARMC10Q8N2F6 343 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 FAM222BQ8WU58 562 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 FAM136AQ96C01 138 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 SMC6Q96SB8 1091 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 ETNK1Q9HBU6 452 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 B4GALT7Q9UBV7 327 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 Q9UFV3 132 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 SLC22A7Q9Y694 548 aa16.06■□□□□ 0.16
TOP3A-202ENST00000461127 HRNRQ86YZ3 2850 aaPredicted RBP16.06■□□□□ 0.16
TOP3A-202ENST00000461127 COL6A5A8TX70 2615 aa16.05■□□□□ 0.16
TOP3A-202ENST00000461127 ZNF860A6NHJ4 632 aa16.05■□□□□ 0.16
TOP3A-202ENST00000461127 SAGE2PA6NJ88 616 aa16.05■□□□□ 0.16
TOP3A-202ENST00000461127 SEC31AO94979 1220 aaKnown RBP16.05■□□□□ 0.16
TOP3A-202ENST00000461127 SLC35G6P0C7Q6 338 aa16.05■□□□□ 0.16
TOP3A-202ENST00000461127 CHRM3P20309 590 aa16.05■□□□□ 0.16
TOP3A-202ENST00000461127 FMO4P31512 558 aa16.05■□□□□ 0.16
TOP3A-202ENST00000461127 CAV1Q03135 178 aa16.05■□□□□ 0.16
TOP3A-202ENST00000461127 SDCCAG8Q86SQ7 713 aaPredicted RBP16.05■□□□□ 0.16
TOP3A-202ENST00000461127 ASPGQ86U10 573 aa16.05■□□□□ 0.16
TOP3A-202ENST00000461127 SLC22A16Q86VW1 577 aa16.05■□□□□ 0.16
TOP3A-202ENST00000461127 PDSS2Q86YH6 399 aa16.05■□□□□ 0.16
TOP3A-202ENST00000461127 PPIL6Q8IXY8 311 aa16.05■□□□□ 0.16
TOP3A-202ENST00000461127 KCT2Q8NC54 265 aa16.05■□□□□ 0.16
TOP3A-202ENST00000461127 SLC13A3Q8WWT9 602 aa16.05■□□□□ 0.16
TOP3A-202ENST00000461127 PTCHD1Q96NR3 888 aa16.05■□□□□ 0.16
TOP3A-202ENST00000461127 ZNF395Q9H8N7 513 aaPredicted RBP16.05■□□□□ 0.16
TOP3A-202ENST00000461127 DMRT3Q9NQL9 472 aa16.05■□□□□ 0.16
TOP3A-202ENST00000461127 ERVK-11Q9UQG0 969 aa16.05■□□□□ 0.16
TOP3A-202ENST00000461127 UQCRHLA0A096LP55 91 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 E5RI56 91 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 B4GALT2O60909 372 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 NIPSNAP2O75323 286 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 ITGA10O75578 1167 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 ATE1O95260 518 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 IVDP26440 423 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 HOXC12P31275 282 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 GRK3P35626 688 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 PLTPP55058 493 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 TRADDQ15628 312 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 ACSBG2Q5FVE4 666 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 RNF187Q5TA31 235 aaPredicted RBP16.04■□□□□ 0.16
TOP3A-202ENST00000461127 CXXC5Q7LFL8 322 aaKnown RBP16.04■□□□□ 0.16
TOP3A-202ENST00000461127 MDGA2Q7Z553 956 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 LIX1LQ8IVB5 337 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 TM4SF19Q96DZ7 209 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 BIRC8Q96P09 236 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 PARD6BQ9BYG5 372 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 ZDHHC11Q9H8X9 412 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 GRHL1Q9NZI5 618 aa16.04■□□□□ 0.16
TOP3A-202ENST00000461127 TRBV11-1A0A0K0K1C0 115 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 FEZF1A0PJY2 475 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 FAM166BA8MTA8 275 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 WDR1O75083 606 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 ESR1P03372 595 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 APRTP07741 180 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 GRIA1P42261 906 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 CLCN2P51788 898 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 SARNPP82979 210 aaKnown RBP16.03■□□□□ 0.16
TOP3A-202ENST00000461127 MORF4L2Q15014 288 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 TYSND1Q2T9J0 566 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 PCID2Q5JVF3 399 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 RNASEH2BQ5TBB1 312 aaKnown RBP16.03■□□□□ 0.16
TOP3A-202ENST00000461127 CAPN13Q6MZZ7 669 aaPredicted RBP16.03■□□□□ 0.16
TOP3A-202ENST00000461127 MRNIPQ6NTE8 343 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 NIPAL1Q6NVV3 410 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 WDR93Q6P2C0 686 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 QSOX2Q6ZRP7 698 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 SLC26A11Q86WA9 606 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 FBXO15Q8NCQ5 510 aaPredicted RBP16.03■□□□□ 0.16
TOP3A-202ENST00000461127 PSD4Q8NDX1 1056 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 ARMC2Q8NEN0 867 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 OR5T3Q8NGG3 340 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 PCBD2Q9H0N5 130 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 ATG10Q9H0Y0 220 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 CCDC177Q9NQR7 707 aaPredicted RBP16.03■□□□□ 0.16
TOP3A-202ENST00000461127 CHRAC1Q9NRG0 131 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms