RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 CA4P22748 312 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 PKLRP30613 574 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 CSTF2P33240 577 aaKnown RBP eCLIP2.7□□□□□ -1.98
HPS3-203ENST00000460822 TUBA1BP68363 451 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 RPP38P78345 283 aaKnown RBP2.7□□□□□ -1.98
HPS3-203ENST00000460822 CHIT1Q13231 466 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 CDH18Q13634 790 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 GIT2Q14161 759 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 SF3B4Q15427 424 aaKnown RBP eCLIP2.7□□□□□ -1.98
HPS3-203ENST00000460822 ZC2HC1CQ53FD0 456 aaPredicted RBP2.7□□□□□ -1.98
HPS3-203ENST00000460822 ARMCX4Q5H9R4 360 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 SIRPB2Q5JXA9 342 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 CENPPQ6IPU0 288 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 ARSKQ6UWY0 536 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 ZNF573Q86YE8 665 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 MUC20Q8N307 709 aaPredicted RBP2.7□□□□□ -1.98
HPS3-203ENST00000460822 DNAJC22Q8N4W6 341 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 MAPKAPK5-AS1Q8N8E1 139 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 LEMD2Q8NC56 503 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 KCNH5Q8NCM2 988 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 OR52M1Q8NGK5 317 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 OR52N5Q8NH56 324 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 ZNF473Q8WTR7 871 aaKnown RBP2.7□□□□□ -1.98
HPS3-203ENST00000460822 HSD17B8Q92506 261 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 ULK4Q96C45 1275 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 ADGRG7Q96K78 797 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 C17orf77Q96MU5 243 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 TPPP3Q9BW30 176 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 OR2B2Q9GZK3 357 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 WWTR1Q9GZV5 400 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 SIRPDQ9H106 197 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 PALMDQ9NP74 551 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.7□□□□□ -1.98
HPS3-203ENST00000460822 FAM153AQ9UHL3 310 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 PSORS1C1Q9UIG5 152 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 PBRM1Q86U86 1689 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 PLXNC1O60486 1568 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 CGNL1Q0VF96 1302 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 CDC42BPAQ5VT25 1732 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 ADGRL2O95490 1459 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 FANCD2Q9BXW9 1451 aa2.7□□□□□ -1.98
HPS3-203ENST00000460822 EIF3AQ14152 1382 aaKnown RBP2.69□□□□□ -1.98
HPS3-203ENST00000460822 ASPDHA6ND91 283 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 ANTXRLA6NF34 631 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 C2orf81A6NN90 581 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 E2F3O00716 465 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 CTSVO60911 334 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 TSC22D2O75157 780 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 SPAG6O75602 509 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 PIGNO95427 931 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 APOHP02749 345 aaPredicted RBP2.69□□□□□ -1.98
HPS3-203ENST00000460822 PCCBP05166 539 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 MMP10P09238 476 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 SFTPCP11686 197 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 LHCGRP22888 699 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 SLC6A12P48065 614 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 THBS3P49746 956 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 GAS1P54826 345 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 MTTPP55157 894 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 CLDN17P56750 224 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 LGALS3BPQ08380 585 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 MRPL28Q13084 256 aaKnown RBP2.69□□□□□ -1.98
HPS3-203ENST00000460822 PDZK1IP1Q13113 114 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 SNTA1Q13424 505 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 HERC3Q15034 1050 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 ZKSCAN8Q15776 578 aaPredicted RBP2.69□□□□□ -1.98
HPS3-203ENST00000460822 SHROOM1Q2M3G4 852 aaPredicted RBP2.69□□□□□ -1.98
HPS3-203ENST00000460822 RABL6Q3YEC7 729 aaPredicted RBP2.69□□□□□ -1.98
HPS3-203ENST00000460822 XKR3Q5GH77 459 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 LDLRAP1Q5SW96 308 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 SLC16A9Q7RTY1 509 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 PLD3Q8IV08 490 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 PELI3Q8N2H9 469 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 CTNNBL1Q8WYA6 563 aaPredicted RBP2.69□□□□□ -1.98
HPS3-203ENST00000460822 CCDC51Q96ER9 411 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 SPAG8Q99932 426 aaPredicted RBP2.69□□□□□ -1.98
HPS3-203ENST00000460822 LRRC2Q9BYS8 371 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 NACAP1Q9BZK3 213 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 EGLN1Q9GZT9 426 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 DPEP3Q9H4B8 488 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 C5orf66Q9H5L9 145 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 ZDHHC6Q9H6R6 413 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 GAREM1Q9H706 876 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 C10orf88Q9H8K7 445 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 RAVER2Q9HCJ3 691 aaKnown RBP2.69□□□□□ -1.98
HPS3-203ENST00000460822 CHST11Q9NPF2 352 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 SDR39U1Q9NRG7 319 aaPredicted RBP2.69□□□□□ -1.98
HPS3-203ENST00000460822 PANK4Q9NVE7 773 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 COX16Q9P0S2 106 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 SLC12A6Q9UHW9 1150 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 TNNQ9UQP3 1299 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 R4GN57 208 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 EIF4G3O43432 1585 aaKnown RBP2.69□□□□□ -1.98
HPS3-203ENST00000460822 IQGAP2Q13576 1575 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 CENPJQ9HC77 1338 aaPredicted RBP2.69□□□□□ -1.98
HPS3-203ENST00000460822 ADCY10Q96PN6 1610 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 RNF17Q9BXT8 1623 aaKnown RBP2.69□□□□□ -1.98
HPS3-203ENST00000460822 PRDM15P57071 1507 aaPredicted RBP2.69□□□□□ -1.98
HPS3-203ENST00000460822 LOC101059948A0A1B0GTJ6 334 aa2.69□□□□□ -1.98
HPS3-203ENST00000460822 A0A1W2PN81 502 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms