RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 TRIM16LQ309B1 348 aa17.61■□□□□ 0.41
SEMA3B-209ENST00000456560 CRTC3Q6UUV7 619 aa17.61■□□□□ 0.41
SEMA3B-209ENST00000456560 UNC5DQ6UXZ4 953 aa17.61■□□□□ 0.41
SEMA3B-209ENST00000456560 ABHD11Q8NFV4 315 aa17.61■□□□□ 0.41
SEMA3B-209ENST00000456560 CIDECQ96AQ7 238 aaPredicted RBP17.61■□□□□ 0.41
SEMA3B-209ENST00000456560 PPCDCQ96CD2 204 aa17.61■□□□□ 0.41
SEMA3B-209ENST00000456560 SLC35A5Q9BS91 424 aa17.61■□□□□ 0.41
SEMA3B-209ENST00000456560 CCDC90BQ9GZT6 254 aa17.61■□□□□ 0.41
SEMA3B-209ENST00000456560 OR52A5Q9H2C5 316 aa17.61■□□□□ 0.41
SEMA3B-209ENST00000456560 KIF17Q9P2E2 1029 aa17.61■□□□□ 0.41
SEMA3B-209ENST00000456560 PCYT1BQ9Y5K3 369 aaPredicted RBP17.61■□□□□ 0.41
SEMA3B-209ENST00000456560 DGKBQ9Y6T7 804 aa17.61■□□□□ 0.41
SEMA3B-209ENST00000456560 FSHRP23945 695 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 FCHO2Q0JRZ9 810 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 NPRL3Q12980 569 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 SPCS2Q15005 226 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 GCNT6Q5T4J0 391 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 VN1R5Q7Z5H4 357 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 ZNF740Q8NDX6 193 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 MTERF3Q96E29 417 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 ZFYVE19Q96K21 471 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 C1GALT1Q9NS00 363 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 AXIN1O15169 862 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 PI15O43692 258 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 NR4A1P22736 598 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 OPRL1P41146 370 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 RXRGP48443 463 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 TAS2R50P59544 299 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 RPP38P78345 283 aaKnown RBP17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 EEF1A2Q05639 463 aaKnown RBP17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 RBBP4Q09028 425 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 CTF1Q16619 201 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 LCTLQ6UWM7 567 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 CCDC80Q76M96 950 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 SFTPA1Q8IWL2 248 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 UBE2E3Q969T4 207 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 ZNF347Q96SE7 839 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 TMEM245Q9H330 911 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 SCN3BQ9NY72 215 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 NDUFAF4Q9P032 175 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 DEC1Q9P2X7 70 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 DAPK2Q9UIK4 370 aa17.6■□□□□ 0.41
SEMA3B-209ENST00000456560 HEPACAM2A8MVW5 462 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 C5orf67F2Z3F1 127 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 KPNA4O00629 521 aaPredicted RBP17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 FUT4P22083 530 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 RRM2P31350 389 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 OCA2Q04671 838 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 ELOAQ14241 798 aaKnown RBP17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 ZNF234Q14588 700 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 ZNF846Q147U1 533 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 PSRC1Q6PGN9 363 aaPredicted RBP17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 ERN2Q76MJ5 926 aaKnown RBP17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 FAM129CQ86XR2 697 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 PPP1R16AQ96I34 528 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 IL17FQ96PD4 163 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 GABARAPL3Q9BY60 117 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 TMEM38AQ9H6F2 299 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 LYVE1Q9Y5Y7 322 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 MRPS14O60783 128 aaKnown RBP17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 NFATC1O95644 943 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 KLK1P06870 262 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 MAP2K4P45985 399 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 CASP9P55211 416 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 EIF4HQ15056 248 aaKnown RBP17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 SMN1Q16637 294 aaKnown RBP17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 FAM78AQ5JUQ0 283 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 PRAMEF14Q5SWL7 426 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 C9orf50Q5SZB4 431 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 PRAMEF13Q5VWM6 474 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 PLA2G15Q8NCC3 412 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 SMG7Q92540 1137 aaKnown RBP17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 TAMM41Q96BW9 452 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 ITPKCQ96DU7 683 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 COX14Q96I36 57 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 RUBCNLQ9H714 662 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 TMEM184CQ9NVA4 438 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 TMEM98Q9Y2Y6 226 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 RWDD3Q9Y3V2 267 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 DENND4AQ7Z401 1863 aa17.59■□□□□ 0.41
SEMA3B-209ENST00000456560 GRXCR1A8MXD5 290 aa17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 CLDN25C9JDP6 229 aa17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 WBP4O75554 376 aaKnown RBP17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 MYOGP15173 224 aa17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 PTX3P26022 381 aaPredicted RBP17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 IDUAP35475 653 aa17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 MASP1P48740 699 aa17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 FADDQ13158 208 aa17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 CAMK2GQ13555 558 aaPredicted RBP17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 SCARB2Q14108 478 aa17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 PDZD3Q86UT5 571 aa17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 OR4C15Q8NGM1 316 aa17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 SPPL2AQ8TCT8 520 aa17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 RORBQ92753 470 aa17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 UBE2FQ969M7 185 aa17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 RAD51AP1Q96B01 352 aa17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 SH3YL1Q96HL8 342 aaPredicted RBP17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 HRASLS5Q96KN8 279 aa17.58■□□□□ 0.4
SEMA3B-209ENST00000456560 BCL7BQ9BQE9 202 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms