RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ITGB7P26010 798 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 SLC6A4P31645 630 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 SDC2P34741 201 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 MAPKAPK2P49137 400 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 RPS24P62847 133 aaKnown RBP9.89□□□□□ -0.83
CLIP4-208ENST00000456385 RHAGQ02094 409 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 TEKQ02763 1124 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 CDH18Q13634 790 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 P2RY14Q15391 338 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 COX20Q5RI15 118 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 KIAA1841Q6NSI8 718 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 ZNF852Q6ZMS4 543 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 PHC2Q8IXK0 858 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 ZBTB2Q8N680 514 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 DTX3Q8N9I9 347 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 SYT14Q8NB59 555 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 GALNT6Q8NCL4 622 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 B3GNT4Q9C0J1 378 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 MCOLN1Q9GZU1 580 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 ACER3Q9NUN7 267 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 TXNL4BQ9NX01 149 aaKnown RBP9.89□□□□□ -0.83
CLIP4-208ENST00000456385 ING3Q9NXR8 418 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 ARL15Q9NXU5 204 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 GLTPQ9NZD2 209 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 FTSJ1Q9UET6 329 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 SSR3Q9UNL2 185 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 HCN4Q9Y3Q4 1203 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 PCDHB9Q9Y5E1 797 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 PCDHB1Q9Y5F3 818 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 NLRC5Q86WI3 1866 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 KCNE1BA0A087WTH5 132 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 LOC102723532A0A0G2JNH3 316 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 CIB4A0PJX0 185 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 ZAR1LA6NP61 321 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 GAPDHSO14556 408 aaPredicted RBP9.89□□□□□ -0.83
CLIP4-208ENST00000456385 SOX14O95416 240 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 ZNF865P0CJ78 1059 aaPredicted RBP9.89□□□□□ -0.83
CLIP4-208ENST00000456385 ETFAP13804 333 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 RPS3P23396 243 aaKnown RBP eCLIP9.89□□□□□ -0.83
CLIP4-208ENST00000456385 CRATP43155 626 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 MAP2K3P46734 347 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 RPIAP49247 311 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 BEX3Q00994 111 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 ABRQ12979 859 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 GPRC6AQ5T6X5 926 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 LCN1P1Q5VSP4 162 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 MFSD14CQ5VZR4 134 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 PDZD3Q86UT5 571 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 TIGD4Q8IY51 512 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 LAS2Q8IYD9 372 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 GPRC5AQ8NFJ5 357 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 UBTD2Q8WUN7 234 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 CHTF18Q8WVB6 975 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 PCNPQ8WW12 178 aaKnown RBP9.89□□□□□ -0.83
CLIP4-208ENST00000456385 PIH1D2Q8WWB5 315 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 MSLNLQ96KJ4 702 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 GTPBP2Q9BX10 602 aaKnown RBP9.89□□□□□ -0.83
CLIP4-208ENST00000456385 ADGRE3Q9BY15 652 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 GPR63Q9BZJ6 419 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 TMEM245Q9H330 911 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 SLC32A1Q9H598 525 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 SLC25A19Q9HC21 320 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 B3GAT2Q9NPZ5 323 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 GPATCH2Q9NW75 528 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 NDUFB11Q9NX14 153 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 ZFP37Q9Y6Q3 630 aaPredicted RBP9.89□□□□□ -0.83
CLIP4-208ENST00000456385 C1orf226A1L170 272 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 PDGFAP04085 211 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 SLC2A2P11168 524 aaPredicted RBP9.88□□□□□ -0.83
CLIP4-208ENST00000456385 ACADMP11310 421 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 MAPK1P28482 360 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 PSEN2P49810 448 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 CRISP1P54107 249 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 SRSF11Q05519 484 aaKnown RBP9.88□□□□□ -0.83
CLIP4-208ENST00000456385 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.88□□□□□ -0.83
CLIP4-208ENST00000456385 GPR162Q16538 588 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 HKDC1Q2TB90 917 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 WSCD2Q2TBF2 565 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 ZBTB37Q5TC79 503 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 DDI2Q5TDH0 399 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 FRMPD2BQ6IN97 320 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 GDPGP1Q6ZNW5 385 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.88□□□□□ -0.83
CLIP4-208ENST00000456385 OR8H3Q8N146 312 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 Q8N402 240 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 OR8J2Q8NGG1 315 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 LRRC20Q8TCA0 184 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 QRFPRQ96P65 431 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 FAM193BQ96PV7 902 aaPredicted RBP9.88□□□□□ -0.83
CLIP4-208ENST00000456385 MTERF1Q99551 399 aaKnown RBP9.88□□□□□ -0.83
CLIP4-208ENST00000456385 ASB8Q9H765 288 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 CCSER2Q9H7U1 834 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 C12orf4Q9NQ89 552 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 DIABLOQ9NR28 239 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 RBFOX1Q9NWB1 397 aaKnown RBP9.88□□□□□ -0.83
CLIP4-208ENST00000456385 SH3BP4Q9P0V3 963 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 COMMD3Q9UBI1 195 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 EIF3KQ9UBQ5 218 aaKnown RBP9.88□□□□□ -0.83
CLIP4-208ENST00000456385 TMCC3Q9ULS5 477 aa9.88□□□□□ -0.83
CLIP4-208ENST00000456385 MAPRE3Q9UPY8 281 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms