RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 CD2P06729 351 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 MTHFD2P13995 350 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 CKMT2P17540 419 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 TNFSF4P23510 183 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 HSD11B1P28845 292 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 HLA-FP30511 346 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 ACSL1P33121 698 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 VLDLRP98155 873 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 CDK3Q00526 305 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 COL9A2Q14055 689 aaPredicted RBP6.95□□□□□ -1.3
CNOT4-206ENST00000428680 C14orf28Q4W4Y0 310 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 PNCKQ6P2M8 343 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 ERICH5Q6P6B1 374 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 ZBTB49Q6ZSB9 765 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 DEFB107AQ8IZN7 70 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 SETD9Q8NE22 299 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 PIK3C3Q8NEB9 887 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 OR13H1Q8NG92 308 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.95□□□□□ -1.3
CNOT4-206ENST00000428680 GRHL3Q8TE85 626 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 GATAD2BQ8WXI9 593 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 SPOCK2Q92563 424 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 Q96MT0 163 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 ACSS3Q9H6R3 686 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 CCNB1IP1Q9NPC3 277 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 GIN1Q9NXP7 522 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 ADAM30Q9UKF2 790 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 CACNA1HO95180 2353 aa6.95□□□□□ -1.3
CNOT4-206ENST00000428680 FTCDNL1E5RQL4 147 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 RNF225M0QZC1 329 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 TAF4O00268 1085 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 ENGP17813 658 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 TARSP26639 723 aaKnown RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 GCH1P30793 250 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 SLC1A2P43004 574 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 XCR1P46094 333 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 GTF2A1P52655 376 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 RPS14P62263 151 aaKnown RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 PPP3R1P63098 170 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 HSD11B2P80365 405 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 SQLEQ14534 574 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 DPY19L1Q2PZI1 675 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 TTMPQ5BVD1 217 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 ARMC3Q5W041 872 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 BICRALQ6AI39 1079 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 CYP2R1Q6VVX0 501 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 CLEC17AQ6ZS10 378 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 LARP4Q71RC2 724 aaKnown RBP eCLIP6.94□□□□□ -1.37e-7■■■■■ 35.5
CNOT4-206ENST00000428680 OR56A1Q8NGH5 318 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 OR8K5Q8NH50 307 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 ISG20Q96AZ6 181 aaKnown RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 CAMK1GQ96NX5 476 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 SIKE1Q9BRV8 207 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 VN1R3Q9BXE9 311 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 SLC6A16Q9GZN6 736 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 STMN3Q9NZ72 180 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 HS3ST3A1Q9Y663 406 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 DOCK5Q9H7D0 1870 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 A0A0A6YYC8 382 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 I3L1I5 382 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 ATF6P18850 670 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 CD9P21926 228 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 SLC5A2P31639 672 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 HSD17B7P56937 341 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 POU6F2P78424 691 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 NFKB2Q00653 900 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 MERTKQ12866 999 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 CHAF1BQ13112 559 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 MYBPC3Q14896 1274 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 IQCCQ4KMZ1 466 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 NCBP2-AS2Q69YL0 99 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 Q6ZS52 159 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 DHDDSQ86SQ9 333 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 ZFPM2Q8WW38 1151 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 MTERF3Q96E29 417 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 SH3GL2Q99962 352 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 XYLT2Q9H1B5 865 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 WDR45Q9Y484 360 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 KRBA1A5PL33 1030 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 CPSF4LA6NMK7 179 aaKnown RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 ZNF891A8MT65 544 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 CHRNB1P11230 501 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 PGCP20142 388 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 POU3F2P20265 443 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 LIMK2P53671 638 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 CBX3Q13185 183 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 RAB39AQ14964 217 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 NDUFAF6Q330K2 333 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 ZNF311Q5JNZ3 666 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 ASCL5Q7RTU5 278 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 SPATA19Q7Z5L4 167 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 ARL10Q8N8L6 244 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 ANKFN1Q8N957 763 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 FAM47BQ8NA70 645 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 OR6K6Q8NGW6 343 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 TRMT10AQ8TBZ6 339 aaKnown RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 MAGEE2Q8TD90 523 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 TSEN15Q8WW01 171 aaKnown RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 POP5Q969H6 163 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms