RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 AP1M2Q9Y6Q5 423 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 KPNA5O15131 536 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 AQP9O43315 295 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 SUV39H1O43463 412 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 PAPLNO95428 1278 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 NTRK1P04629 796 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 SPNP16150 400 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 HMGA2P52926 109 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 TLE2Q04725 743 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 MICAQ29983 383 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 CRB2Q5IJ48 1285 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 SPOUT1Q5T280 376 aaKnown RBP9.43□□□□□ -0.9
MSH2-202ENST00000406134 PLEKHG7Q6ZR37 379 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 C11orf96Q7Z7L8 435 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 LYSMD2Q8IV50 215 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 CDC26Q8NHZ8 85 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 NFKBIDQ8NI38 313 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 CORO1BQ9BR76 489 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 MENTQ9BUN1 341 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 WRAP53Q9BUR4 548 aaKnown RBP9.43□□□□□ -0.9
MSH2-202ENST00000406134 HMG20AQ9NP66 347 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 AMBNQ9NP70 447 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 DAPK2Q9UIK4 370 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 KCND3Q9UK17 655 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 PIPSLA2A3N6 862 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 ANTXRLA6NF34 631 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 CLCA1A8K7I4 914 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 EFCAB9A8MZ26 197 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 FOXE1O00358 373 aaPredicted RBP9.42□□□□□ -0.9
MSH2-202ENST00000406134 FKBP9O95302 570 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 CISD3P0C7P0 127 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 NUDT6P53370 316 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 ZNF763Q0D2J5 394 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 TEAD2Q15562 447 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 TMPRSS11BQ86T26 416 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.42□□□□□ -0.9
MSH2-202ENST00000406134 FAM83FQ8NEG4 500 aaPredicted RBP9.42□□□□□ -0.9
MSH2-202ENST00000406134 OR52N2Q8NGI0 321 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 OR52J3Q8NH60 311 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 C16orf78Q8WTQ4 265 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 ZNF296Q8WUU4 475 aaPredicted RBP9.42□□□□□ -0.9
MSH2-202ENST00000406134 CCM2Q9BSQ5 444 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 FUZQ9BT04 418 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 TAPBPLQ9BX59 468 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 ABCG4Q9H172 646 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 REEP4Q9H6H4 257 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 LHX9Q9NQ69 397 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 SPHK2Q9NRA0 654 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 SACM1LQ9NTJ5 587 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 PCDHGB3Q9Y5G1 929 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 A8MVJ9 347 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 HIDE1A8MVS5 230 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 FGF18O76093 207 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 KCNK2O95069 426 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 MYCP01106 439 aaPredicted RBP9.42□□□□□ -0.9
MSH2-202ENST00000406134 TP53P04637 393 aaPredicted RBP9.42□□□□□ -0.9
MSH2-202ENST00000406134 LAG3P18627 525 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 ACADLP28330 430 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 GRK3P35626 688 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 FCHO2Q0JRZ9 810 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 LY6G5CQ5SRR4 150 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 FAM83HQ6ZRV2 1179 aaPredicted RBP9.42□□□□□ -0.9
MSH2-202ENST00000406134 GPR65Q8IYL9 337 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 OR10G2Q8NGC3 310 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 OR4D11Q8NGI4 311 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 OR5AK3PQ8NH89 298 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 CXorf40BQ96DE9 158 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 SLC6A18Q96N87 628 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 DEFB118Q96PH6 123 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 HEPHQ9BQS7 1158 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 SLC35A5Q9BS91 424 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 COPS4Q9BT78 406 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 CENPOQ9BU64 300 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 CCNB1IP1Q9NPC3 277 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 FZD3Q9NPG1 666 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 SPATA7Q9P0W8 599 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 ZNF282Q9UDV7 671 aaPredicted RBP9.42□□□□□ -0.9
MSH2-202ENST00000406134 CKAP5Q14008 2032 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 TNFRSF11BO00300 401 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 STSP08842 583 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 ASMTP46597 345 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 ST13P50502 369 aaKnown RBP9.42□□□□□ -0.9
MSH2-202ENST00000406134 TAP2Q03519 686 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 OCA2Q04671 838 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 DUSP7Q16829 419 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 BCL7AQ4VC05 210 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 KLHL17Q6TDP4 642 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 SFTPA1Q8IWL2 248 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 GPR32P1Q8NGA4 272 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 S100ZQ8WXG8 99 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 OR51E2Q9H255 320 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 OR51B5Q9H339 312 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 GIN1Q9NXP7 522 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 KIF17Q9P2E2 1029 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 REV1Q9UBZ9 1251 aa9.42□□□□□ -0.9
MSH2-202ENST00000406134 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.42□□□□□ -0.9
MSH2-202ENST00000406134 MDC1Q14676 2089 aaKnown RBP9.41□□□□□ -0.9
MSH2-202ENST00000406134 A0A0C4DFX4 3053 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 PRAMEF27A3QJZ7 478 aa9.41□□□□□ -0.9
MSH2-202ENST00000406134 GPR37L1O60883 481 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms