RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CAMKMTQ7Z624 323 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 PAF1Q8N7H5 531 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 KBTBD8Q8NFY9 601 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 LILRB4Q8NHJ6 448 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 CNPPD1Q9BV87 410 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 SLC25A19Q9HC21 320 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 ADPRHL2Q9NX46 363 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 PEX16Q9Y5Y5 336 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 LINC00854A0A1B0GVQ3 168 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 OR2AG2A6NM03 316 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 PREPP48147 710 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 HNMTP50135 292 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 MFSD14CQ5VZR4 134 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 VN1R5Q7Z5H4 357 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 OR7G3Q8NG95 312 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 OR4A15Q8NGL6 344 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 APOBEC4Q8WW27 367 aaKnown RBP13.34□□□□□ -0.27
NUP98-204ENST00000397004 SLC30A2Q9BRI3 323 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 TRPM5Q9NZQ8 1165 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 SH3BP4Q9P0V3 963 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 REV1Q9UBZ9 1251 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 LOC110117498-PIK3R3F6TDL0 507 aa13.33□□□□□ -0.27
NUP98-204ENST00000397004 PRMT3O60678 531 aa13.33□□□□□ -0.27
NUP98-204ENST00000397004 C8GP07360 202 aa13.33□□□□□ -0.27
NUP98-204ENST00000397004 CTSAP10619 480 aa13.33□□□□□ -0.27
NUP98-204ENST00000397004 ACLYP53396 1101 aa13.33□□□□□ -0.27
NUP98-204ENST00000397004 ACSM2AQ08AH3 577 aa13.33□□□□□ -0.27
NUP98-204ENST00000397004 CSTF3Q12996 717 aaKnown RBP13.33□□□□□ -0.27
NUP98-204ENST00000397004 UAP1L1Q3KQV9 507 aa13.33□□□□□ -0.27
NUP98-204ENST00000397004 LYPLAL1Q5VWZ2 237 aa13.33□□□□□ -0.27
NUP98-204ENST00000397004 ACSM2BQ68CK6 577 aa13.33□□□□□ -0.27
NUP98-204ENST00000397004 C11orf65Q8NCR3 313 aa13.33□□□□□ -0.27
NUP98-204ENST00000397004 SPNS1Q9H2V7 528 aa13.33□□□□□ -0.27
NUP98-204ENST00000397004 GULP1Q9UBP9 304 aa13.33□□□□□ -0.27
NUP98-204ENST00000397004 POFUT2Q9Y2G5 429 aa13.33□□□□□ -0.27
NUP98-204ENST00000397004 OBSL1O75147 1896 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 DSPPQ9NZW4 1301 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 TRBV4-1A0A0J9YWV2 114 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 SLC16A8O95907 504 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 FHP07954 510 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 NAE1Q13564 534 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 ANGPTL8Q6UXH0 198 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 TPRG1Q6ZUI0 275 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 NANOGNBQ7Z5D8 188 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 COMTD1Q86VU5 262 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 CELF5Q8N6W0 485 aaKnown RBP13.33□□□□□ -0.28
NUP98-204ENST00000397004 AQP11Q8NBQ7 271 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 FYTTD1Q96QD9 318 aaKnown RBP13.33□□□□□ -0.28
NUP98-204ENST00000397004 NRTNQ99748 197 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 TTYH2Q9BSA4 534 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 TSEN34Q9BSV6 310 aaKnown RBP13.33□□□□□ -0.28
NUP98-204ENST00000397004 MKLN1Q9UL63 735 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 RUVBL1Q9Y265 456 aaKnown RBP13.33□□□□□ -0.28
NUP98-204ENST00000397004 ADAMDEC1O15204 470 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 NDUFB5O43674 189 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 MED26O95402 600 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 ATP1B2P14415 290 aaPredicted RBP13.33□□□□□ -0.28
NUP98-204ENST00000397004 HMGA2P52926 109 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 RPS13P62277 151 aaKnown RBP13.33□□□□□ -0.28
NUP98-204ENST00000397004 HYAL2Q12891 473 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 FAM214AQ32MH5 1076 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 FBXO43Q4G163 708 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 TMC5Q6UXY8 1006 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 CHST14Q8NCH0 376 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 TRNT1Q96Q11 434 aaKnown RBP13.33□□□□□ -0.28
NUP98-204ENST00000397004 MIXL1Q9H2W2 232 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 MAP4K5Q9Y4K4 846 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 SOCS5O75159 536 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 CSO75390 466 aaKnown RBP13.33□□□□□ -0.28
NUP98-204ENST00000397004 CLEC2LP0C7M8 214 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 BDKRB1P46663 353 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 PCBP3P57721 371 aaKnown RBP13.33□□□□□ -0.28
NUP98-204ENST00000397004 HOXC5Q00444 222 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 EIF4HQ15056 248 aaKnown RBP13.33□□□□□ -0.28
NUP98-204ENST00000397004 LIPJQ5W064 366 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 PLAG1Q6DJT9 500 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 FRMPD2BQ6IN97 320 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 CCDC80Q76M96 950 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 RNF130Q86XS8 419 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 WDR48Q8TAF3 677 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 NEIL2Q969S2 332 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 MED8Q96G25 268 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 SGK2Q9HBY8 427 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 FZD3Q9NPG1 666 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 TIGARQ9NQ88 270 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 STOX2Q9P2F5 926 aaPredicted RBP13.33□□□□□ -0.28
NUP98-204ENST00000397004 DUSP12Q9UNI6 340 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 TRAPPC4Q9Y296 219 aa13.33□□□□□ -0.28
NUP98-204ENST00000397004 H0YIV9 168 aa13.32□□□□□ -0.28
NUP98-204ENST00000397004 PLD2O14939 933 aa13.32□□□□□ -0.28
NUP98-204ENST00000397004 SCO2O43819 266 aa13.32□□□□□ -0.28
NUP98-204ENST00000397004 SOX14O95416 240 aa13.32□□□□□ -0.28
NUP98-204ENST00000397004 HIST1H2AGP0C0S8 130 aaPredicted RBP13.32□□□□□ -0.28
NUP98-204ENST00000397004 HIST1H2ADP20671 130 aa13.32□□□□□ -0.28
NUP98-204ENST00000397004 PDHA2P29803 388 aa13.32□□□□□ -0.28
NUP98-204ENST00000397004 SPINT3P49223 89 aa13.32□□□□□ -0.28
NUP98-204ENST00000397004 SCARB2Q14108 478 aa13.32□□□□□ -0.28
NUP98-204ENST00000397004 RPS26P11Q5JNZ5 115 aaPredicted RBP13.32□□□□□ -0.28
NUP98-204ENST00000397004 ASTLQ6HA08 431 aaPredicted RBP13.32□□□□□ -0.28
NUP98-204ENST00000397004 ZNF367Q7RTV3 350 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms