RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ANKRD10Q9NXR5 420 aa8.3□□□□□ -1.08
ATG4A-205ENST00000394892 NSMCE4AQ9NXX6 385 aa8.3□□□□□ -1.08
ATG4A-205ENST00000394892 DMGDHQ9UI17 866 aaKnown RBP8.3□□□□□ -1.08
ATG4A-205ENST00000394892 DYRK1BQ9Y463 629 aa8.3□□□□□ -1.08
ATG4A-205ENST00000394892 MDC1Q14676 2089 aaKnown RBP8.3□□□□□ -1.08
ATG4A-205ENST00000394892 TMEM200CA6NKL6 621 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 A8MUA0 341 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 UBXN8O00124 270 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 CYR61O00622 381 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 NDC80O14777 642 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 PRKNO60260 465 aaPredicted RBP8.29□□□□□ -1.08
ATG4A-205ENST00000394892 PRAMEF2O60811 474 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 NEURL1O76050 574 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 STSP08842 583 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 GSTA2P09210 222 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 ICAM2P13598 275 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 STMN1P16949 149 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 GNAZP19086 355 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 TFEBP19484 476 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 IL10P22301 178 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 NR0B1P51843 470 aaKnown RBP8.29□□□□□ -1.08
ATG4A-205ENST00000394892 RAB10P61026 200 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 BTN3A2P78410 334 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 BMPR2Q13873 1038 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 ZRSR2Q15696 482 aaKnown RBP8.29□□□□□ -1.08
ATG4A-205ENST00000394892 CDKL4Q5MAI5 379 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 GRTP1Q5TC63 336 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 ABHD17BQ5VST6 288 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 SP5Q6BEB4 398 aaPredicted RBP8.29□□□□□ -1.08
ATG4A-205ENST00000394892 SPINK14Q6IE38 97 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 ABHD17CQ6PCB6 329 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 TMIGD1Q6UXZ0 262 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 QSOX2Q6ZRP7 698 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 CCDC25Q86WR0 208 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 CTAGE3PQ8IX95 158 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 APCDD1LQ8NCL9 501 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 TRPV3Q8NET8 790 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 KCTD4Q8WVF5 259 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 NXNL1Q96CM4 212 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 PTCHD1Q96NR3 888 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 F2RL3Q96RI0 385 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 CSF3RQ99062 836 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.29□□□□□ -1.08
ATG4A-205ENST00000394892 CDCP1Q9H5V8 836 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 ALG9Q9H6U8 611 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 NT5DC2Q9H857 520 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 KCNK13Q9HB14 408 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 PRDM7Q9NQW5 492 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 OLAHQ9NV23 265 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 DNAJC11Q9NVH1 559 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 NINJ2Q9NZG7 142 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 KCMF1Q9P0J7 381 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 NUP210LQ5VU65 1888 aa8.29□□□□□ -1.08
ATG4A-205ENST00000394892 CSMD1Q96PZ7 3565 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 DYTNA2CJ06 578 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 GABRR3A8MPY1 467 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 PRSS44E7EML9 344 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 RTCAO00442 366 aaKnown RBP8.28□□□□□ -1.08
ATG4A-205ENST00000394892 ERI3O43414 337 aaKnown RBP8.28□□□□□ -1.08
ATG4A-205ENST00000394892 PRMT3O60678 531 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 CLEC3AO75596 197 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 STK16O75716 305 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 ALDOAP04075 364 aaKnown RBP8.28□□□□□ -1.08
ATG4A-205ENST00000394892 C2P06681 752 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 RNH1P13489 461 aaKnown RBP8.28□□□□□ -1.08
ATG4A-205ENST00000394892 CERS1P27544 350 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 SPRP35270 261 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-205ENST00000394892 CASP2P42575 452 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 PLA2G16P53816 162 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 MLF1P58340 268 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 ATP6V0D1P61421 351 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 PCDH1Q08174 1060 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 OR1C1Q15619 314 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 EXT1Q16394 746 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 ZNF766Q5HY98 468 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 SULT1C3Q6IMI6 304 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 FAM180AQ6UWF9 173 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 C16orf47Q6ZP98 133 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-205ENST00000394892 FRA10AC1Q70Z53 315 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 ABHD13Q7L211 337 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 FGD2Q7Z6J4 655 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 SIAH3Q8IW03 269 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 MCEMP1Q8IX19 187 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 PLD6Q8N2A8 252 aaKnown RBP8.28□□□□□ -1.08
ATG4A-205ENST00000394892 ARMC10Q8N2F6 343 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 BCORP1Q8N888 145 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 ZNF321PQ8N8H1 164 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 ZNF473Q8WTR7 871 aaKnown RBP8.28□□□□□ -1.08
ATG4A-205ENST00000394892 UBTD2Q8WUN7 234 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 EXT2Q93063 718 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 GAL3ST3Q96A11 431 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 MRRFQ96E11 262 aaKnown RBP8.28□□□□□ -1.08
ATG4A-205ENST00000394892 TSPAN17Q96FV3 270 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 SCMH1Q96GD3 660 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 ZNF354BQ96LW1 612 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 LPAR4Q99677 370 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 SORBS1Q9BX66 1292 aaKnown RBP8.28□□□□□ -1.08
ATG4A-205ENST00000394892 CD244Q9BZW8 370 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 EHD1Q9H4M9 534 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 CLK4Q9HAZ1 481 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms