RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 ATG2AQ2TAZ0 1938 aa11.6□□□□□ -0.55
CAPRIN1-202ENST00000389645 FCARP24071 287 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 NR4A2P43354 598 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 TRPC1P48995 793 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 SEPHS1P49903 392 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 SHQ1Q6PI26 577 aaKnown RBP11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 ZZZ3Q8IYH5 903 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 OTUB1Q96FW1 271 aaPredicted RBP11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 MYADMQ96S97 322 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 FEVQ99581 238 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 NRTNQ99748 197 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 COPS4Q9BT78 406 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 TMEM9Q9P0T7 183 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 DKK3Q9UBP4 350 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 PCDHB11Q9Y5F2 797 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 DOCK8Q8NF50 2099 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 VCANP13611 3396 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 K7ESM1 405 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 TPST2O60704 377 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 SEC14L2O76054 403 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 PTGER1P34995 402 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 SOX9P48436 509 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 SERPINB10P48595 397 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 CLK3P49761 638 aaKnown RBP11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 MLLT10P55197 1068 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 GAB1Q13480 694 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 COX20Q5RI15 118 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 RNF130Q86XS8 419 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 VANGL1Q8TAA9 524 aaPredicted RBP11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 CHFRQ96EP1 664 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 RDH12Q96NR8 316 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 TUBA1CQ9BQE3 449 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 CTPS2Q9NRF8 586 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 PPIL1Q9Y3C6 166 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 TCF20Q9UGU0 1960 aaKnown RBP11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 CCDC88CQ9P219 2028 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 SOBPA7XYQ1 873 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 CLDN25C9JDP6 229 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 HOXC11O43248 304 aaPredicted RBP11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 IMPA1P29218 277 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 SLC6A12P48065 614 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 PRKAG1P54619 331 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 DPY19L1Q2PZI1 675 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 KIAA1614Q5VZ46 1190 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 ERICH5Q6P6B1 374 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 PARM1Q6UWI2 310 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 NLGN4XQ8N0W4 816 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 GANCQ8TET4 914 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 BTN2A2Q8WVV5 523 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 FGF14Q92915 247 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 TESCQ96BS2 214 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 TAMM41Q96BW9 452 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 OR4K3Q96R72 315 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 ZSCAN5AQ9BUG6 496 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 MIR1-1HGQ9H1L0 117 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 HMG20AQ9NP66 347 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 TMEM45AQ9NWC5 275 aa11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 URB1O60287 2271 aaKnown RBP11.59□□□□□ -0.55
CAPRIN1-202ENST00000389645 FAM47E-STBD1D6RA91 191 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 J3KTA2 159 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 NFATC1O95644 943 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 MRPL19P49406 292 aaKnown RBP11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 GP2P55259 537 aaKnown RBP11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 HBA1P69905 142 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 NPRL3Q12980 569 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 DGUOKQ16854 277 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 ZNF805Q5CZA5 627 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 LRIF1Q5T3J3 769 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 LIPJQ5W064 366 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 ZDHHC20Q5W0Z9 365 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 PARS2Q7L3T8 475 aaKnown RBP11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 MMP21Q8N119 569 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 L3MBTL4Q8NA19 623 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 OR10G2Q8NGC3 310 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 OR9Q2Q8NGE9 314 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 WDR48Q8TAF3 677 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 ADAMTS16Q8TE57 1224 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 CCM2Q9BSQ5 444 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 FAM120CQ9NX05 1096 aaKnown RBP11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 ERVK-11Q9UQG0 969 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 ZNF701M0R085 212 aaPredicted RBP11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 SCAMP2O15127 329 aaKnown RBP11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 CPNE6O95741 557 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 CHRM5P08912 532 aaPredicted RBP11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 CTSKP43235 329 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 TPTEP56180 551 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 HSPB3Q12988 150 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 TP53BP2Q13625 1128 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 NFE2L1Q14494 772 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 ZNF234Q14588 700 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 CLCA4Q14CN2 919 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 USP43Q70EL4 1123 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 IGFN1Q86VF2 1251 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 ZFP90Q8TF47 636 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 PHF10Q8WUB8 498 aaKnown RBP11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 ZNF480Q8WV37 535 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 TANKQ92844 425 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 MAGIXQ9H6Y5 334 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 SIRT5Q9NXA8 310 aa11.58□□□□□ -0.56
CAPRIN1-202ENST00000389645 CKAP5Q14008 2032 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms