RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 CXCR6O00574 342 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 FPGTO14772 594 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 ACP5P13686 325 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 KELP23276 732 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 TNFRSF4P43489 277 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 CLCNKAP51800 687 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 RPA4Q13156 261 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 PRAMEF14Q5SWL7 426 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 TMTC4Q5T4D3 741 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 PRAMEF13Q5VWM6 474 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 METRNLQ641Q3 311 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 NXPE4Q6UWF7 544 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 RFPL4BQ6ZWI9 263 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 ZNF551Q7Z340 670 aaPredicted RBP13.67□□□□□ -0.22
CLCN4-201ENST00000380829 PEX5LQ8IYB4 626 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 TP53I13Q8NBR0 393 aaPredicted RBP13.67□□□□□ -0.22
CLCN4-201ENST00000380829 DNAJB8Q8NHS0 232 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 FAM162AQ96A26 154 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 SH3KBP1Q96B97 665 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 REPS1Q96D71 796 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 RIPOR3Q96MK2 946 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 EFCAB11Q9BUY7 163 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 ING2Q9H160 280 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 GORASP2Q9H8Y8 452 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 NEK6Q9HC98 313 aa13.67□□□□□ -0.22
CLCN4-201ENST00000380829 A0A1W2PQU0 124 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 RGS13O14921 159 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 SCAMP2O15127 329 aaKnown RBP13.66□□□□□ -0.22
CLCN4-201ENST00000380829 PCDH7O60245 1069 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 SCN2BO60939 215 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 ABCB7O75027 752 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 CPSF4O95639 269 aaKnown RBP13.66□□□□□ -0.22
CLCN4-201ENST00000380829 LDLRP01130 860 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 HTR1AP08908 422 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 JUNBP17275 347 aaPredicted RBP13.66□□□□□ -0.22
CLCN4-201ENST00000380829 CLK3P49761 638 aaKnown RBP13.66□□□□□ -0.22
CLCN4-201ENST00000380829 GZMMP51124 257 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 SRSF11Q05519 484 aaKnown RBP13.66□□□□□ -0.22
CLCN4-201ENST00000380829 DUOXA1Q1HG43 343 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 DPY19L1Q2PZI1 675 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 SPIN4Q56A73 249 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 IER5LQ5T953 404 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 SPARTQ8N0X7 666 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 OXR1Q8N573 874 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 PSMA8Q8TAA3 256 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 PNPT1Q8TCS8 783 aaKnown RBP13.66□□□□□ -0.22
CLCN4-201ENST00000380829 TP53INP1Q96A56 240 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 WDR34Q96EX3 536 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 MIR1-1HGQ9H1L0 117 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 DMRT3Q9NQL9 472 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 ENPP5Q9UJA9 477 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 DNAH14Q0VDD8 3507 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 GABRR3A8MPY1 467 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 FAM220BPB1ANY3 271 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 SCAMP1O15126 338 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 KMOO15229 486 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 PI15O43692 258 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 PRMT3O60678 531 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 EGFP01133 1207 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 COL9A1P20849 921 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 MAGP20916 626 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 NTSR1P30989 418 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 TIA1P31483 386 aaKnown RBP eCLIP13.66□□□□□ -0.22
CLCN4-201ENST00000380829 TRIM23P36406 574 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 ADARB1P78563 741 aaKnown RBP13.66□□□□□ -0.22
CLCN4-201ENST00000380829 SGCGQ13326 291 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 NKG7Q16617 165 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 CTF1Q16619 201 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 FAM98BQ52LJ0 330 aaKnown RBP13.66□□□□□ -0.22
CLCN4-201ENST00000380829 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.66□□□□□ -0.22
CLCN4-201ENST00000380829 ZNF621Q6ZSS3 439 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 CALHM3Q86XJ0 350 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 LAS2Q8IYD9 372 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 IL17RCQ8NAC3 791 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 OR5K2Q8NHB8 316 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 GDF15Q99988 308 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 DUSP26Q9BV47 211 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 ABCB10Q9NRK6 738 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 TAC3Q9UHF0 121 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 UTS2RQ9UKP6 389 aa13.66□□□□□ -0.22
CLCN4-201ENST00000380829 CCDC85CA6NKD9 419 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 SNPHO15079 494 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 ASNA1O43681 348 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 INMTO95050 263 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 KCNK2O95069 426 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 DNTTP04053 509 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 SLC35G4P0C7Q5 338 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 RAP2AP10114 183 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 SPNP16150 400 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 PSMB5P28074 263 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 CTHP32929 405 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 SEPHS1P49903 392 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 RPS21P63220 83 aaKnown RBP13.65□□□□□ -0.22
CLCN4-201ENST00000380829 CHRNB3Q05901 458 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 TUBA3CQ13748 450 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 PON2Q15165 354 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 HIST2H2ACQ16777 129 aaPredicted RBP13.65□□□□□ -0.22
CLCN4-201ENST00000380829 HIST2H2AA3Q6FI13 130 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 COMMD6Q7Z4G1 85 aa13.65□□□□□ -0.22
CLCN4-201ENST00000380829 OR8J2Q8NGG1 315 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms