RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 SCAMP1O15126 338 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 SLC22A1O15245 554 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 KRT75O95678 551 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 CATP04040 527 aaKnown RBP14.76□□□□□ -0.05
RER1-203ENST00000378513 CTSAP10619 480 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 SPNP16150 400 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 JUNDP17535 347 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 SLC7A9P82251 487 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 CNTN1Q12860 1018 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 TIGD6Q17RP2 521 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 PLPP4Q5VZY2 271 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 LIPJQ5W064 366 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 MICAL3Q7RTP6 2002 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 GGHQ92820 318 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 DMRTB1Q96MA1 342 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 CENPOQ9BU64 300 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 DOHHQ9BU89 302 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 WASH3PC4AMC7 463 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 SLCO2B1O94956 709 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 MPC1LP0DKB6 136 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 VIPR1P32241 457 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 SERPINB10P48595 397 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 IL18R1Q13478 541 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 SCARB2Q14108 478 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 DMC1Q14565 340 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 DEPDC1Q5TB30 811 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 VPS37AQ8NEZ2 397 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 UCN3Q969E3 161 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 ITPKCQ96DU7 683 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 SLX1AQ9BQ83 275 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 TP63Q9H3D4 680 aaPredicted RBP14.76□□□□□ -0.05
RER1-203ENST00000378513 CTPS2Q9NRF8 586 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 SNX11Q9Y5W9 270 aa14.76□□□□□ -0.05
RER1-203ENST00000378513 NPC1O15118 1278 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 ACVR2AP27037 513 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 TIA1P31483 386 aaKnown RBP eCLIP14.75□□□□□ -0.05
RER1-203ENST00000378513 MVDP53602 400 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 NFE2L1Q14494 772 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 HIST2H2ACQ16777 129 aaPredicted RBP14.75□□□□□ -0.05
RER1-203ENST00000378513 FAHD1Q6P587 224 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 CPXM2Q8N436 756 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 VN1R2Q8NFZ6 395 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 BTN2A2Q8WVV5 523 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 IRF7Q92985 503 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 GLYATL1Q969I3 302 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 ZNF566Q969W8 418 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 OR5M11Q96RB7 305 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 DSN1Q9H410 356 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 C11orf16Q9NQ32 467 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 TMEM39AQ9NV64 488 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 QPCTLQ9NXS2 382 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 ERVW-1Q9UQF0 538 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 B3GNT3Q9Y2A9 372 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 AP3M1Q9Y2T2 418 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 TMEM98Q9Y2Y6 226 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 KCNE2Q9Y6J6 123 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 ASNA1O43681 348 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 CXCL10P02778 98 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 TGM1P22735 817 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 CD40LGP29965 261 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 POLR2LP62875 67 aaKnown RBP14.75□□□□□ -0.05
RER1-203ENST00000378513 KCNC4Q03721 635 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 CSTF3Q12996 717 aaKnown RBP14.75□□□□□ -0.05
RER1-203ENST00000378513 DUSP7Q16829 419 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 PROX2Q3B8N5 592 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 HENMT1Q5T8I9 393 aaKnown RBP14.75□□□□□ -0.05
RER1-203ENST00000378513 WDR53Q7Z5U6 358 aaPredicted RBP14.75□□□□□ -0.05
RER1-203ENST00000378513 CELF5Q8N6W0 485 aaKnown RBP14.75□□□□□ -0.05
RER1-203ENST00000378513 VANGL1Q8TAA9 524 aaPredicted RBP14.75□□□□□ -0.05
RER1-203ENST00000378513 CCM2Q9BSQ5 444 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 GABARAPL1Q9H0R8 117 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 BOLA1Q9Y3E2 137 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 PCDHGA3Q9Y5H0 932 aa14.75□□□□□ -0.05
RER1-203ENST00000378513 PRUNE2Q8WUY3 3088 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 SH3BP5O60239 455 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 ATG13O75143 517 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 NME6O75414 186 aaPredicted RBP14.74□□□□□ -0.05
RER1-203ENST00000378513 PSIP1O75475 530 aaKnown RBP14.74□□□□□ -0.05
RER1-203ENST00000378513 POLR2EP19388 210 aaKnown RBP14.74□□□□□ -0.05
RER1-203ENST00000378513 PRPH2P23942 346 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 CTSKP43235 329 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 SELENOWP63302 87 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 ST3GAL4Q11206 333 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 NUMA1Q14980 2115 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 MED22Q15528 200 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 GRHL2Q6ISB3 625 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 MED27Q6P2C8 311 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 SLCO4C1Q6ZQN7 724 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 PRSS48Q7RTY5 328 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 C11orf96Q7Z7L8 435 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 FAM20CQ8IXL6 584 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 STX19Q8N4C7 294 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 DNAJB8Q8NHS0 232 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 WFDC6Q9BQY6 131 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 EMILIN2Q9BXX0 1053 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 CHST8Q9H2A9 424 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 IMPAD1Q9NX62 359 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 MS4A12Q9NXJ0 267 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 DUSP12Q9UNI6 340 aa14.74□□□□□ -0.05
RER1-203ENST00000378513 PCDHGB3Q9Y5G1 929 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms