RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 COL21A1Q96P44 957 aa11.1□□□□□ -0.63
SEC23B-204ENST00000377475 NTMT1Q9BV86 223 aa11.1□□□□□ -0.63
SEC23B-204ENST00000377475 HCFC1R1Q9NWW0 138 aa11.1□□□□□ -0.63
SEC23B-204ENST00000377475 NUFIP1Q9UHK0 495 aaKnown RBP11.1□□□□□ -0.63
SEC23B-204ENST00000377475 RUVBL1Q9Y265 456 aaKnown RBP11.1□□□□□ -0.63
SEC23B-204ENST00000377475 DYRK1BQ9Y463 629 aa11.1□□□□□ -0.63
SEC23B-204ENST00000377475 PCDHB11Q9Y5F2 797 aa11.1□□□□□ -0.63
SEC23B-204ENST00000377475 PRAMEF33A0A0G2JMD5 474 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 M0R082 166 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 PRAMEF10O60809 474 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 CPNE3O75131 537 aaKnown RBP11.09□□□□□ -0.63
SEC23B-204ENST00000377475 TNFRSF21O75509 655 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 NNMTP40261 264 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 EIF2DP41214 584 aaKnown RBP11.09□□□□□ -0.63
SEC23B-204ENST00000377475 HOXC5Q00444 222 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 PIN1Q13526 163 aaPredicted RBP11.09□□□□□ -0.63
SEC23B-204ENST00000377475 RAET1GQ6H3X3 334 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 TPRG1Q6ZUI0 275 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 GDPD3Q7L5L3 318 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 HSD11B1LQ7Z5J1 315 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 WDR53Q7Z5U6 358 aaPredicted RBP11.09□□□□□ -0.63
SEC23B-204ENST00000377475 GLCCI1Q86VQ1 547 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 LAX1Q8IWV1 398 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 OR7G3Q8NG95 312 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 CD99L2Q8TCZ2 262 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 TADA1Q96BN2 335 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 DOHHQ9BU89 302 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 EMILIN2Q9BXX0 1053 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 ABCG4Q9H172 646 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 SLC25A13Q9UJS0 675 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 CCL26Q9Y258 94 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 SPIN1Q9Y657 262 aaPredicted RBP11.09□□□□□ -0.63
SEC23B-204ENST00000377475 PLXNA1Q9UIW2 1896 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 A0A1W2PRB8 838 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 FEZF1A0PJY2 475 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 OR2A25A4D2G3 310 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 CLCA1A8K7I4 914 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 SLC28A2O43868 658 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 ENTPD6O75354 484 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 CCNB2O95067 398 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 IGLV3-27P01718 113 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 HMGA1P17096 107 aaKnown RBP11.09□□□□□ -0.63
SEC23B-204ENST00000377475 WASP42768 502 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 RGS6P49758 472 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 RAB8AP61006 207 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.63
SEC23B-204ENST00000377475 MAP4K2Q12851 820 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 ELAVL2Q12926 359 aaKnown RBP11.09□□□□□ -0.63
SEC23B-204ENST00000377475 DUSP7Q16829 419 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 TBRG1Q3YBR2 411 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 C5orf22Q49AR2 442 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 IQCCQ4KMZ1 466 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 ZNF385BQ569K4 471 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 ZNF57Q68EA5 555 aaPredicted RBP11.09□□□□□ -0.63
SEC23B-204ENST00000377475 PAMR1Q6UXH9 720 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 TRIM46Q7Z4K8 759 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 PJA1Q8NG27 643 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 ZNF461Q8TAF7 563 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 PCNPQ8WW12 178 aaKnown RBP11.09□□□□□ -0.63
SEC23B-204ENST00000377475 KLK6Q92876 244 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 PHF21AQ96BD5 680 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 CCDC115Q96NT0 180 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 SEMA3GQ9NS98 782 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 COQ3Q9NZJ6 369 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 NDUFAF4Q9P032 175 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 TMEM98Q9Y2Y6 226 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 GASTP01350 101 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 SYT6Q5T7P8 510 aaPredicted RBP11.09□□□□□ -0.63
SEC23B-204ENST00000377475 PLD4Q96BZ4 506 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 TRMT61BQ9BVS5 477 aaKnown RBP11.09□□□□□ -0.63
SEC23B-204ENST00000377475 C1QTNF3Q9BXJ4 246 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 ANKRA2Q9H9E1 313 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 GPBP1L1Q9HC44 474 aaPredicted RBP11.09□□□□□ -0.63
SEC23B-204ENST00000377475 ANKMY1Q9P2S6 941 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 ATP6V1HQ9UI12 483 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 TEKT2Q9UIF3 430 aa11.09□□□□□ -0.63
SEC23B-204ENST00000377475 SMLR1H3BR10 107 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 PLOD3O60568 738 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 AOC2O75106 756 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 LEFTY1O75610 366 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 IFNW1P05000 195 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 IL3P08700 152 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 ELFN1P0C7U0 828 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 SRCP12931 536 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 SELPP16109 830 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 HLA-FP30511 346 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 KRT33BQ14525 404 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 GRIN2CQ14957 1233 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 SNAP47Q5SQN1 464 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 BRAT1Q6PJG6 821 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 LHFPL3Q86UP9 236 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 NPAS4Q8IUM7 802 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 OR5D16Q8NGK9 328 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 APH1BQ8WW43 257 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 YIPF6Q96EC8 236 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 CASD1Q96PB1 797 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 CDK5RAP1Q96SZ6 601 aaKnown RBP11.08□□□□□ -0.64
SEC23B-204ENST00000377475 TMEM246Q9BRR3 403 aa11.08□□□□□ -0.64
SEC23B-204ENST00000377475 QRSL1Q9H0R6 528 aaKnown RBP11.08□□□□□ -0.64
SEC23B-204ENST00000377475 SPG21Q9NZD8 308 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms