RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 PAIP2Q9BPZ3 127 aaKnown RBP13.04□□□□□ -0.32
SSR4-202ENST00000370085 BRF2Q9HAW0 419 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 SEMA3GQ9NS98 782 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 CTSFQ9UBX1 484 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 POLHQ9Y253 713 aa13.04□□□□□ -0.32
SSR4-202ENST00000370085 MRPS33Q9Y291 106 aaKnown RBP13.04□□□□□ -0.32
SSR4-202ENST00000370085 MRPS2Q9Y399 296 aaKnown RBP13.04□□□□□ -0.32
SSR4-202ENST00000370085 MRPS18BQ9Y676 258 aaKnown RBP13.04□□□□□ -0.32
SSR4-202ENST00000370085 IGLV3-12A0A075B6K2 115 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 TMEM120BA0PK00 339 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 CDC14CA4D256 554 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 MAGEB17A8MXT2 336 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 HMGB1P1B2RPK0 211 aaPredicted RBP13.03□□□□□ -0.32
SSR4-202ENST00000370085 PEX12O00623 359 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 KLF7O75840 302 aaPredicted RBP13.03□□□□□ -0.32
SSR4-202ENST00000370085 HEXBP07686 556 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 SMIM10L1P0DMW3 83 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 PRKAR1AP10644 381 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 XCR1P46094 333 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 RPS18P62269 152 aaKnown RBP13.03□□□□□ -0.32
SSR4-202ENST00000370085 RPS13P62277 151 aaKnown RBP13.03□□□□□ -0.32
SSR4-202ENST00000370085 GALNT1Q10472 559 aaPredicted RBP13.03□□□□□ -0.32
SSR4-202ENST00000370085 ABHD17CQ6PCB6 329 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 COX15Q7KZN9 410 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 PRSS41Q7RTY9 318 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 PAGE2Q7Z2X7 111 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 VN1R5Q7Z5H4 357 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 GBP7Q8N8V2 638 aaPredicted RBP13.03□□□□□ -0.32
SSR4-202ENST00000370085 AMER3Q8N944 861 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 ANKRD42Q8N9B4 389 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 AGAP11Q8TF27 550 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 METTL21AQ8WXB1 218 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 ZBTB9Q96C00 473 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 TLCD1Q96CP7 247 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 MTFMTQ96DP5 389 aaKnown RBP13.03□□□□□ -0.32
SSR4-202ENST00000370085 SMIM10Q96HG1 83 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 ATP6V1G3Q96LB4 118 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 QRFPRQ96P65 431 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 F2RL3Q96RI0 385 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 CRB3Q9BUF7 120 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 GATA5Q9BWX5 397 aaPredicted RBP13.03□□□□□ -0.32
SSR4-202ENST00000370085 OR51B5Q9H339 312 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 KLHL31Q9H511 634 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 SOX17Q9H6I2 414 aaPredicted RBP13.03□□□□□ -0.32
SSR4-202ENST00000370085 PFDN4Q9NQP4 134 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 SLC22A11Q9NSA0 550 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 HCN3Q9P1Z3 774 aa13.03□□□□□ -0.32
SSR4-202ENST00000370085 CCDC88CQ9P219 2028 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 LAMA5O15230 3695 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 ARHGAP10A1A4S6 786 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 SYNDIG1LA6NDD5 238 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 ZNF860A6NHJ4 632 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 VSTM2BA6NLU5 285 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 PPP6CO00743 305 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 SEMA3DO95025 777 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 ITGB2P05107 769 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 UROSP10746 265 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 GRK2P25098 689 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 OTX2P32243 289 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 ETV4P43268 484 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 NEK2P51955 445 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 EMP2P54851 167 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 RRADP55042 308 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 KLC1Q07866 573 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 CSTF3Q12996 717 aaKnown RBP13.02□□□□□ -0.33
SSR4-202ENST00000370085 SRSF6Q13247 344 aaKnown RBP13.02□□□□□ -0.33
SSR4-202ENST00000370085 COL9A2Q14055 689 aaPredicted RBP13.02□□□□□ -0.33
SSR4-202ENST00000370085 IMPG1Q17R60 797 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 COL28A1Q2UY09 1125 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 MINDY4Q4G0A6 757 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 SGO1Q5FBB7 561 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 OR4C11Q6IEV9 310 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 ADNP2Q6IQ32 1131 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 C19orf48Q6RUI8 117 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 PDSS2Q86YH6 399 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 TRIM42Q8IWZ5 723 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 DTWD1Q8N5C7 304 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 C7orf57Q8NEG2 295 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 TBC1D20Q96BZ9 403 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 SPSB2Q99619 263 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 MECRQ9BV79 373 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 ACSS2Q9NR19 701 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 MS4A12Q9NXJ0 267 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 C19orf25Q9UFG5 118 aaPredicted RBP13.02□□□□□ -0.33
SSR4-202ENST00000370085 C3orf18Q9UK00 162 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 MKL2Q9ULH7 1088 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 MAN2B2Q9Y2E5 1009 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 CACNA1BQ00975 2339 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 ZFHX4Q86UP3 3567 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 CFAP47Q6ZTR5 3102 aa13.02□□□□□ -0.33
SSR4-202ENST00000370085 BLACEA4D250 179 aa13.01□□□□□ -0.33
SSR4-202ENST00000370085 IDSB3KWA1 339 aa13.01□□□□□ -0.33
SSR4-202ENST00000370085 AGPSO00116 658 aa13.01□□□□□ -0.33
SSR4-202ENST00000370085 MANBAO00462 879 aa13.01□□□□□ -0.33
SSR4-202ENST00000370085 CLDN4O14493 209 aa13.01□□□□□ -0.33
SSR4-202ENST00000370085 NKX2-8O15522 239 aa13.01□□□□□ -0.33
SSR4-202ENST00000370085 CHST10O43529 356 aa13.01□□□□□ -0.33
SSR4-202ENST00000370085 SH3BGRLO75368 114 aa13.01□□□□□ -0.33
SSR4-202ENST00000370085 BMP10O95393 424 aa13.01□□□□□ -0.33
SSR4-202ENST00000370085 PDYNP01213 254 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms