RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 CYP17A1P05093 508 aa14.34□□□□□ -0.11
UBAP1-202ENST00000359544 CA3P07451 260 aa14.34□□□□□ -0.11
UBAP1-202ENST00000359544 TALDO1P37837 337 aa14.34□□□□□ -0.11
UBAP1-202ENST00000359544 CRYBB2P43320 205 aa14.34□□□□□ -0.11
UBAP1-202ENST00000359544 IKZF1Q13422 519 aa14.34□□□□□ -0.11
UBAP1-202ENST00000359544 TRIQKQ629K1 86 aa14.34□□□□□ -0.11
UBAP1-202ENST00000359544 NADSYN1Q6IA69 706 aa14.34□□□□□ -0.11
UBAP1-202ENST00000359544 NTMT1Q9BV86 223 aa14.34□□□□□ -0.11
UBAP1-202ENST00000359544 NSUN3Q9H649 340 aaKnown RBP14.34□□□□□ -0.11
UBAP1-202ENST00000359544 LIN7BQ9HAP6 207 aa14.34□□□□□ -0.11
UBAP1-202ENST00000359544 PTPRSQ13332 1948 aa14.33□□□□□ -0.11
UBAP1-202ENST00000359544 VCANP13611 3396 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 ABHD14A-ACY1A0A1B0GW23 586 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 A0A1W2PQL4 384 aaPredicted RBP14.33□□□□□ -0.12
UBAP1-202ENST00000359544 FPGTO14772 594 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 ORC5O43913 435 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 RFPL3O75679 317 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 GJB3O75712 270 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 TNNI3P19429 210 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 POU3F3P20264 500 aaPredicted RBP14.33□□□□□ -0.12
UBAP1-202ENST00000359544 PSMA3P25788 255 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 CDKN1CP49918 316 aaPredicted RBP14.33□□□□□ -0.12
UBAP1-202ENST00000359544 PSAPL1Q6NUJ1 521 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 DDX53Q86TM3 631 aaKnown RBP14.33□□□□□ -0.12
UBAP1-202ENST00000359544 LHFPL5Q8TAF8 219 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 CREB3L4Q8TEY5 395 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 NECTIN4Q96NY8 510 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 PANX1Q96RD7 426 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 MTIF3Q9H2K0 278 aaKnown RBP14.33□□□□□ -0.12
UBAP1-202ENST00000359544 KCNN2Q9H2S1 579 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 MIXL1Q9H2W2 232 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 WWOXQ9NZC7 414 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 SH3BP4Q9P0V3 963 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 SPTBN5Q9NRC6 3674 aaKnown RBP14.33□□□□□ -0.12
UBAP1-202ENST00000359544 WASHC1A8K0Z3 465 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 I3L521 148 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 RFXAPO00287 272 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 PTGESO14684 152 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 SLC43A1O75387 559 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 TNFRSF21O75509 655 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 HLA-DQB1P01920 261 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 RPS3P23396 243 aaKnown RBP eCLIP14.33□□□□□ -0.12
UBAP1-202ENST00000359544 PTGER3P43115 390 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 KIR3DL1P43629 444 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 CLCN7P51798 805 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 CLDN20P56880 219 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 RGS1Q08116 209 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.33□□□□□ -0.12
UBAP1-202ENST00000359544 UBXN11Q5T124 520 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 UBE2J2Q8N2K1 259 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 C9orf62Q8N4C0 152 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 DEFB123Q8N688 67 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 SCAMP5Q8TAC9 235 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 TSSK3Q96PN8 268 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 TRIB3Q96RU7 358 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 EGFL8Q99944 293 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 MCUBQ9NWR8 336 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 ELF5Q9UKW6 265 aaPredicted RBP14.33□□□□□ -0.12
UBAP1-202ENST00000359544 PPT2Q9UMR5 302 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 DLGAP4Q9Y2H0 992 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 DHRS7Q9Y394 339 aa14.33□□□□□ -0.12
UBAP1-202ENST00000359544 MAGEB17A8MXT2 336 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 TAPBPO15533 448 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 RAMP2O60895 175 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 SCO1O75880 301 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 FHP07954 510 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 HMBSP08397 361 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 MC4RP32245 332 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 SOX3P41225 446 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 PER3P56645 1201 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 SRP54P61011 504 aaKnown RBP14.32□□□□□ -0.12
UBAP1-202ENST00000359544 MICAQ29983 383 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 WSCD2Q2TBF2 565 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 METTL2BQ6P1Q9 378 aaKnown RBP14.32□□□□□ -0.12
UBAP1-202ENST00000359544 KIF18BQ86Y91 864 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 PIANPQ8IYJ0 282 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 ZNF683Q8IZ20 524 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 LGI4Q8N135 537 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 STK40Q8N2I9 435 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 SYNPOQ8N3V7 929 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 AP3S1Q92572 193 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 AKAP1Q92667 903 aaKnown RBP eCLIP14.32□□□□□ -0.12
UBAP1-202ENST00000359544 SH3KBP1Q96B97 665 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 TRMT61AQ96FX7 289 aaKnown RBP14.32□□□□□ -0.12
UBAP1-202ENST00000359544 GPR137Q96N19 417 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 SAMD11Q96NU1 681 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 MAPKAP1Q9BPZ7 522 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 DOHHQ9BU89 302 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 CD244Q9BZW8 370 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 NDUFB11Q9NX14 153 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 PHF11Q9UIL8 331 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 OARD1Q9Y530 152 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 TRANK1O15050 2925 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 FAM240BA0A1B0GVZ2 78 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 TRIM77I1YAP6 450 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 TSC22D2O75157 780 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 CDRT1O95170 752 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 GUCA1CO95843 209 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 ATF4P18848 351 aaPredicted RBP14.32□□□□□ -0.12
UBAP1-202ENST00000359544 IGFBP6P24592 240 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms