RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 SLC6A12P48065 614 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 SPIBQ01892 262 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 VN1R2Q8NFZ6 395 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 OR7G1Q8NGA0 311 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 NXPE3Q969Y0 559 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 IL1RAPQ9NPH3 570 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 QPCTLQ9NXS2 382 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 STOML2Q9UJZ1 356 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 KLHL20Q9Y2M5 609 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 PCMT1P22061 227 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 PRKAG1P54619 331 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 TBPL1P62380 186 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 NXNL2Q5VZ03 156 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 ATG9BQ674R7 924 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 CCBE1Q6UXH8 406 aaPredicted RBP13.23□□□□□ -0.29
EBF3-201ENST00000355311 CALHM3Q86XJ0 350 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 PRRG3Q9BZD7 231 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 SPHK2Q9NRA0 654 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 ZSCAN5BA6NJL1 495 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 CCNDBP1O95273 360 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 NTN1O95631 604 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 CHI3L1P36222 383 aaPredicted RBP13.23□□□□□ -0.29
EBF3-201ENST00000355311 ILF2Q12905 390 aaKnown RBP13.23□□□□□ -0.29
EBF3-201ENST00000355311 TUBA3CQ13748 450 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 DGUOKQ16854 277 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 RBM45Q8IUH3 476 aaKnown RBP13.23□□□□□ -0.29
EBF3-201ENST00000355311 P3H2Q8IVL5 708 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 SLAIN1Q8ND83 568 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 MCFD2Q8NI22 146 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 HDAC2Q92769 488 aaKnown RBP13.23□□□□□ -0.29
EBF3-201ENST00000355311 TRIM43Q96BQ3 446 aaPredicted RBP13.23□□□□□ -0.29
EBF3-201ENST00000355311 WFDC6Q9BQY6 131 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 ASPSCR1Q9BZE9 553 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 EXO1Q9UQ84 846 aaKnown RBP13.23□□□□□ -0.29
EBF3-201ENST00000355311 ERVW-1Q9UQF0 538 aa13.23□□□□□ -0.29
EBF3-201ENST00000355311 SYNDIG1LA6NDD5 238 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 PRAMEF25A6NGN4 478 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 GFRA2O00451 464 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 SUV39H1O43463 412 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 FKTNO75072 461 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 GCM2O75603 506 aaPredicted RBP13.22□□□□□ -0.29
EBF3-201ENST00000355311 STSP08842 583 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 CD36P16671 472 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 PSMA3P25788 255 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 HSPB3Q12988 150 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 CLCA4Q14CN2 919 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 CEP78Q5JTW2 689 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 PARS2Q7L3T8 475 aaKnown RBP13.22□□□□□ -0.29
EBF3-201ENST00000355311 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.22□□□□□ -0.29
EBF3-201ENST00000355311 PLA2G15Q8NCC3 412 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 OR5AR1Q8NGP9 310 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 SLC35A5Q9BS91 424 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 XKR8Q9H6D3 395 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 ASF1AQ9Y294 204 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 TRBV23OR9-2A0A075B6M9 112 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 FAM220BPB1ANY3 271 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 PRRT4C9JH25 899 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 GFYI3L273 518 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 LRRTM2O43300 516 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 LZTS3O60299 673 aaPredicted RBP13.22□□□□□ -0.29
EBF3-201ENST00000355311 PRPS2P11908 318 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 PRPS1L1P21108 318 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 ENDOUP21128 410 aaKnown RBP13.22□□□□□ -0.29
EBF3-201ENST00000355311 CD9P21926 228 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 EIF2DP41214 584 aaKnown RBP13.22□□□□□ -0.29
EBF3-201ENST00000355311 CAMK2GQ13555 558 aaPredicted RBP13.22□□□□□ -0.29
EBF3-201ENST00000355311 RGNQ15493 299 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 FXNQ16595 210 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 SLC5A12Q1EHB4 618 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 P2RY8Q86VZ1 359 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 CADM2Q8N3J6 435 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 CLP1Q92989 425 aaKnown RBP13.22□□□□□ -0.29
EBF3-201ENST00000355311 SLIRPQ9GZT3 109 aaKnown RBP13.22□□□□□ -0.29
EBF3-201ENST00000355311 RDH14Q9HBH5 336 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 TRPV5Q9NQA5 729 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 HS3ST2Q9Y278 367 aa13.22□□□□□ -0.29
EBF3-201ENST00000355311 TNFRSF11BO00300 401 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 DYRK3O43781 588 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 EFEMP2O95967 443 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 KRT8P05787 483 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 C8GP07360 202 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 PTPN2P17706 415 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 LIPAP38571 399 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 NNMTP40261 264 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 CLK1P49759 484 aaKnown RBP13.21□□□□□ -0.29
EBF3-201ENST00000355311 NPRL3Q12980 569 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 DMC1Q14565 340 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 NDUFA5Q16718 116 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 LRRC26Q2I0M4 334 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 ZNF783Q6ZMS7 281 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 COMMD6Q7Z4G1 85 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 HIPK1Q86Z02 1210 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 RHOXF1Q8NHV9 184 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 DYNC2LI1Q8TCX1 351 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 ECHDC3Q96DC8 303 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 LGALS12Q96DT0 336 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 CCDC115Q96NT0 180 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 OSGEPL1Q9H4B0 414 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 SAMD4AQ9UPU9 718 aaKnown RBP13.21□□□□□ -0.29
EBF3-201ENST00000355311 TRPM6Q9BX84 2022 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms