RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 CLEC4EQ9ULY5 219 aa9.03□□□□□ -0.96
SMG6-202ENST00000354901 PRRG1O14668 218 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 RPLP0P05388 317 aaKnown RBP9.02□□□□□ -0.97
SMG6-202ENST00000354901 HMGA1P17096 107 aaKnown RBP9.02□□□□□ -0.97
SMG6-202ENST00000354901 ITPKAP23677 461 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 HNF1BP35680 557 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 RPL6Q02878 288 aaKnown RBP9.02□□□□□ -0.97
SMG6-202ENST00000354901 BOP1Q14137 746 aaKnown RBP9.02□□□□□ -0.97
SMG6-202ENST00000354901 CCDC149Q6ZUS6 474 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 ZNF767PQ75MW2 155 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 TMC8Q8IU68 726 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 BBS7Q8IWZ6 715 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 MSRB3Q8IXL7 192 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 STX19Q8N4C7 294 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 ZBTB2Q8N680 514 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 ZNF548Q8NEK5 533 aaPredicted RBP9.02□□□□□ -0.97
SMG6-202ENST00000354901 NETO1Q8TDF5 533 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 SELENOMQ8WWX9 145 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 TMEM80Q96HE8 168 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 EBPLQ9BY08 206 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 UGT2B28Q9BY64 529 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 ZNF556Q9HAH1 456 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 ING3Q9NXR8 418 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 MKLN1Q9UL63 735 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 GRIP1Q9Y3R0 1128 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 PLXNA3P51805 1871 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 GBF1Q92538 1859 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 GLYATL1P3A0A0U1RQE8 302 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 A0A1W2PQ45 241 aaPredicted RBP9.02□□□□□ -0.97
SMG6-202ENST00000354901 A0A1W2PQY0 241 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 TULP3O75386 442 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 TSPAN19P0C672 248 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 BCKDHAP12694 445 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 BPIP17213 487 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 DGKAP23743 735 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 TGFBR2P37173 567 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 NRIP1P48552 1158 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 STK19P49842 368 aaPredicted RBP9.02□□□□□ -0.97
SMG6-202ENST00000354901 GZMKP49863 264 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 SF1Q15637 639 aaKnown RBP9.02□□□□□ -0.97
SMG6-202ENST00000354901 ERICH5Q6P6B1 374 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 ST8SIA4Q92187 359 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 APOLD1Q96LR9 279 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 CD244Q9BZW8 370 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 ATG10Q9H0Y0 220 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 ELAC1Q9H777 363 aaKnown RBP9.02□□□□□ -0.97
SMG6-202ENST00000354901 GALNT9Q9HCQ5 603 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 DYRK4Q9NR20 520 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 NLKQ9UBE8 527 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 GMEB2Q9UKD1 530 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 NEUROG3Q9Y4Z2 214 aa9.02□□□□□ -0.97
SMG6-202ENST00000354901 GAPDHSO14556 408 aaPredicted RBP9.01□□□□□ -0.97
SMG6-202ENST00000354901 STK16O75716 305 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 INHAP05111 366 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 GJA1P17302 382 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 DCTP40126 519 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 ETV1P50549 477 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 ERVK-21P61565 698 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 SLC35A2P78381 396 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 ZXDBP98169 803 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 ZNF33BQ06732 778 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 SYT6Q5T7P8 510 aaPredicted RBP9.01□□□□□ -0.97
SMG6-202ENST00000354901 TMEM81Q6P7N7 255 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 BRAT1Q6PJG6 821 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 LHFPL5Q8TAF8 219 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 CEP76Q8TAP6 659 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 UTP15Q8TED0 518 aaKnown RBP9.01□□□□□ -0.97
SMG6-202ENST00000354901 PIH1D2Q8WWB5 315 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 MYLIPQ8WY64 445 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 RHBDF1Q96CC6 855 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 SDHCQ99643 169 aaPredicted RBP9.01□□□□□ -0.97
SMG6-202ENST00000354901 SLC22A4Q9H015 551 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 RACGAP1Q9H0H5 632 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 POLMQ9NP87 494 aaPredicted RBP9.01□□□□□ -0.97
SMG6-202ENST00000354901 DIABLOQ9NR28 239 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 DNAJB9Q9UBS3 223 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 MBD1Q9UIS9 605 aaPredicted RBP9.01□□□□□ -0.97
SMG6-202ENST00000354901 PCDHB1Q9Y5F3 818 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 ARNTLO00327 626 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 MANBAO00462 879 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 ZNF254O75437 659 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 CREG1O75629 220 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 PDYNP01213 254 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 HRGP04196 525 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 STSP08842 583 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 SELPP16109 830 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 CDKN2CP42773 168 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 RPIAP49247 311 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 MAP2K6P52564 334 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 TTC29Q8NA56 475 aaPredicted RBP9.01□□□□□ -0.97
SMG6-202ENST00000354901 SETD9Q8NE22 299 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 ASB15Q8WXK1 588 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 PLD4Q96BZ4 506 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 TTLL2Q9BWV7 592 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 GPRC5BQ9NZH0 403 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 ALG5Q9Y673 324 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 SIGLEC5O15389 551 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 PQBP1O60828 265 aaKnown RBP9.01□□□□□ -0.97
SMG6-202ENST00000354901 SLC22A5O76082 557 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 TOXO94900 526 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms