RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 TRIM3O75382 744 aaPredicted RBP14.74□□□□□ -0.05
LMNA-201ENST00000347559 MSL3P1P0C860 447 aa14.74□□□□□ -0.05
LMNA-201ENST00000347559 TALDO1P37837 337 aa14.74□□□□□ -0.05
LMNA-201ENST00000347559 SERINC3Q13530 473 aa14.74□□□□□ -0.05
LMNA-201ENST00000347559 TAF1AQ15573 450 aaPredicted RBP14.74□□□□□ -0.05
LMNA-201ENST00000347559 GARNL3Q5VVW2 1013 aa14.74□□□□□ -0.05
LMNA-201ENST00000347559 ARSKQ6UWY0 536 aa14.74□□□□□ -0.05
LMNA-201ENST00000347559 TMEM86AQ8N2M4 240 aa14.74□□□□□ -0.05
LMNA-201ENST00000347559 PPTC7Q8NI37 304 aa14.74□□□□□ -0.05
LMNA-201ENST00000347559 TESCQ96BS2 214 aa14.74□□□□□ -0.05
LMNA-201ENST00000347559 METTL2AQ96IZ6 378 aaKnown RBP14.74□□□□□ -0.05
LMNA-201ENST00000347559 SERPINB11Q96P15 392 aa14.74□□□□□ -0.05
LMNA-201ENST00000347559 TRIM62Q9BVG3 475 aa14.74□□□□□ -0.05
LMNA-201ENST00000347559 B3GAT2Q9NPZ5 323 aa14.74□□□□□ -0.05
LMNA-201ENST00000347559 ELF5Q9UKW6 265 aaPredicted RBP14.74□□□□□ -0.05
LMNA-201ENST00000347559 A0A0D9SEW6 157 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 PRAMEF33A0A0G2JMD5 474 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 HPGDSO60760 199 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 PRAMEF10O60809 474 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 MTRF1O75570 445 aaKnown RBP14.73□□□□□ -0.05
LMNA-201ENST00000347559 APOL3O95236 402 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 CLDN9O95484 217 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 EPOP01588 193 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 ABATP80404 500 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 AANATQ16613 207 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 MFSD14CQ5VZR4 134 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 BRAT1Q6PJG6 821 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 USP30Q70CQ3 517 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 FAM181AQ8N9Y4 354 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 MARVELD3Q96A59 401 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 C1QTNF6Q9BXI9 259 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 MED28Q9H204 178 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 KCNN2Q9H2S1 579 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 SPNS1Q9H2V7 528 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 CNOT2Q9NZN8 540 aaKnown RBP14.73□□□□□ -0.05
LMNA-201ENST00000347559 PRAMEF1O95521 474 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 IGFBP1P08833 259 aaPredicted RBP14.73□□□□□ -0.05
LMNA-201ENST00000347559 PRPS2P11908 318 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 CRATP43155 626 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 CLDN20P56880 219 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 ANGPT1Q15389 498 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 ASB18Q6ZVZ8 466 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 STK40Q8N2I9 435 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 PGBD3Q8N328 593 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 TOE1Q96GM8 510 aaKnown RBP14.73□□□□□ -0.05
LMNA-201ENST00000347559 NELL2Q99435 816 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 RTP3Q9BQQ7 232 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 TRAF4Q9BUZ4 470 aaPredicted RBP14.73□□□□□ -0.05
LMNA-201ENST00000347559 ERVMER34-1Q9H9K5 563 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 PRDM5Q9NQX1 630 aaPredicted RBP14.73□□□□□ -0.05
LMNA-201ENST00000347559 SNX11Q9Y5W9 270 aa14.73□□□□□ -0.05
LMNA-201ENST00000347559 WASH4PA8MWX3 477 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 PROM1O43490 865 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 EBLN1P0CF75 366 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 RHAGQ02094 409 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 DDX39BQ13838 428 aaKnown RBP14.72□□□□□ -0.05
LMNA-201ENST00000347559 C1DQ13901 141 aaKnown RBP14.72□□□□□ -0.05
LMNA-201ENST00000347559 XKR4Q5GH76 650 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 KIAA1324Q6UXG2 1013 aaKnown RBP14.72□□□□□ -0.05
LMNA-201ENST00000347559 GDPGP1Q6ZNW5 385 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 TLK2Q86UE8 772 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 OR52P1PQ8NH57 321 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 LKAAEAR1Q8TD35 194 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 KLHL6Q8WZ60 621 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 BOCQ9BWV1 1114 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 HDHD2Q9H0R4 259 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 SPIN1Q9Y657 262 aaPredicted RBP14.72□□□□□ -0.05
LMNA-201ENST00000347559 GTPBP1O00178 669 aaKnown RBP14.72□□□□□ -0.05
LMNA-201ENST00000347559 SLC9A3R1O14745 358 aaPredicted RBP14.72□□□□□ -0.05
LMNA-201ENST00000347559 PCDH7O60245 1069 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 TPST2O60704 377 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 OR4Q2P0C623 313 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 CPT1AP50416 773 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 CRTC2Q53ET0 693 aaPredicted RBP14.72□□□□□ -0.05
LMNA-201ENST00000347559 BCL2L15Q5TBC7 163 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 TAGAPQ8N103 731 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 NAGSQ8N159 534 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 CARNMT1Q8N4J0 409 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 LRRC17Q8N6Y2 441 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 OR7D4Q8NG98 312 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 ANKRD36A6QL64 1941 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 YY2O15391 372 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 STK16O75716 305 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 CNMDO75829 334 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 B3GAT3O94766 335 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 ALDH1A1P00352 501 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 LAMP1P11279 417 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 RGS4P49798 205 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 KLHL12Q53G59 568 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.72□□□□□ -0.053e-7■□□□□ 9.5
LMNA-201ENST00000347559 USP7Q93009 1102 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 MYEOVQ96EZ4 313 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 MSLNLQ96KJ4 702 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 TRIB3Q96RU7 358 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 C2orf49Q9BVC5 232 aaPredicted RBP14.72□□□□□ -0.05
LMNA-201ENST00000347559 PADI2Q9Y2J8 665 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 DNAH12Q6ZR08 3092 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 NINQ8N4C6 2090 aa14.72□□□□□ -0.05
LMNA-201ENST00000347559 TRAV6A0A075B6T7 132 aa14.71□□□□□ -0.05
LMNA-201ENST00000347559 SH3D21A4FU49 640 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms