RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 MICAL3Q7RTP6 2002 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 TRBV5-3A0A0A0MS03 114 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 RGS14O43566 566 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 KLK8O60259 260 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 SCN2BO60939 215 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 CCNB2O95067 398 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 AVPP01185 164 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ADRA1AP35348 466 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 HSPA7P48741 367 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 CDKN2DP55273 166 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 PUDPQ08623 228 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 HNRNPA0Q13151 305 aaKnown RBP7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ADAM15Q13444 863 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 TAF1CQ15572 869 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-201ENST00000343524 LTB4RQ15722 352 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 SNAPC1Q16533 368 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 IQCCQ4KMZ1 466 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ZNF628Q5EBL2 1059 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 STRIP1Q5VSL9 837 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 FAM171A1Q5VUB5 890 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 MRNIPQ6NTE8 343 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 BRICD5Q6PL45 260 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 FGD2Q7Z6J4 655 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 RYBPQ8N488 228 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-201ENST00000343524 LRRC71Q8N4P6 559 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ATPAF2Q8N5M1 289 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 MS4A15Q8N5U1 240 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 EIF4E3Q8N5X7 224 aaKnown RBP7.82□□□□□ -1.16
ATG4A-201ENST00000343524 TMEM145Q8NBT3 493 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 PLA2G15Q8NCC3 412 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 B3GNT7Q8NFL0 401 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 OR4D10Q8NGI6 311 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 OR2T4Q8NH00 348 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 OR2T11Q8NH01 316 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 CEP76Q8TAP6 659 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 TMEM163Q8TC26 289 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ACER1Q8TDN7 264 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ST8SIA2Q92186 375 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ZBED6CLQ96FA7 236 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ZNF419Q96HQ0 510 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-201ENST00000343524 KCTD7Q96MP8 289 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 NPY6RQ99463 290 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 MAPKAP1Q9BPZ7 522 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 B3GNT5Q9BYG0 378 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 FN3KQ9H479 309 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 HHATLQ9HCP6 504 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 PTPRHQ9HD43 1115 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 DCAF16Q9NXF7 216 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 HCN3Q9P1Z3 774 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 SLC2A6Q9UGQ3 507 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 GPN3Q9UHW5 284 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ANKRD36A6QL64 1941 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 SCN9AQ15858 1988 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 MUC3AQ02505 3323 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 DOCK1Q14185 1865 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 TRAV19A0A0A6YYK7 116 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 LOC285095A0A1B0GVY8 99 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 SLC22A23A1A5C7 686 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 HNRNPCL2B2RXH8 293 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 M0QYT0 321 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 CBX4O00257 560 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 CASC3O15234 703 aaKnown RBP7.82□□□□□ -1.16
ATG4A-201ENST00000343524 CDRT1O95170 752 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 SYN1P17600 705 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 GABRB1P18505 474 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 OGNP20774 298 aaKnown RBP7.82□□□□□ -1.16
ATG4A-201ENST00000343524 DNASE1P24855 282 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ADRA1BP35368 520 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 IDH2P48735 452 aaKnown RBP7.82□□□□□ -1.16
ATG4A-201ENST00000343524 TGM4P49221 684 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 CENPAP49450 140 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 RAG2P55895 527 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 FGL1Q08830 312 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 NCF4Q15080 339 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 FCN2Q15485 313 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 OR4D1Q15615 310 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ETFDHQ16134 617 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 FAM174BQ3ZCQ3 159 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ZNF57Q68EA5 555 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-201ENST00000343524 NADSYN1Q6IA69 706 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 MACC1Q6ZN28 852 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 HTR3DQ70Z44 454 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 MRPL10Q7Z7H8 261 aaKnown RBP7.82□□□□□ -1.16
ATG4A-201ENST00000343524 NKAPQ8N5F7 415 aaKnown RBP7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ZNF655Q8N720 491 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-201ENST00000343524 UXS1Q8NBZ7 420 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 TMIEQ8NEW7 156 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 SCMH1Q96GD3 660 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 PAWRQ96IZ0 340 aaKnown RBP7.82□□□□□ -1.16
ATG4A-201ENST00000343524 COQ10AQ96MF6 247 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 OR5M11Q96RB7 305 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 RTP3Q9BQQ7 232 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 TMEM175Q9BSA9 504 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 LRFN3Q9BTN0 628 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 REG4Q9BYZ8 158 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 CDT1Q9H211 546 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 CRISPLD1Q9H336 500 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ACTL8Q9H568 366 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ARNT2Q9HBZ2 717 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 RAD18Q9NS91 495 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms