RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 SEC14L6B5MCN3 397 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 LINC01387J3KSC0 135 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 STK25O00506 426 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 HPGDSO60760 199 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 KHDRBS3O75525 346 aaKnown RBP4.01□□□□□ -1.77
NEDD4-201ENST00000338963 SORBS2O94875 1100 aaKnown RBP4.01□□□□□ -1.77
NEDD4-201ENST00000338963 CBX7O95931 251 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 CST1P01037 141 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 INHAP05111 366 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 CNPP09543 421 aaKnown RBP4.01□□□□□ -1.77
NEDD4-201ENST00000338963 PRPS1L1P21108 318 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 NFYAP23511 347 aaPredicted RBP4.01□□□□□ -1.77
NEDD4-201ENST00000338963 HOXA9P31269 272 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 MC3RP41968 323 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 PTGFRP43088 359 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 IDH3GP51553 393 aaPredicted RBP4.01□□□□□ -1.77
NEDD4-201ENST00000338963 PRKXP51817 358 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 DNAJB13P59910 316 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 SERINC3Q13530 473 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 KRTCAP3Q53RY4 240 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 RAB12Q6IQ22 244 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 SPESP1Q6UW49 350 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 FAM160A2Q8N612 972 aaPredicted RBP4.01□□□□□ -1.77
NEDD4-201ENST00000338963 NANOGP1Q8N7R0 232 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 DMBX1Q8NFW5 382 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 C15orf40Q8WUR7 153 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 BSNDQ8WZ55 320 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 FAM162AQ96A26 154 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 BARD1Q99728 777 aaKnown RBP4.01□□□□□ -1.77
NEDD4-201ENST00000338963 H2AFJQ9BTM1 129 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 DPH7Q9BTV6 452 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 LRRC3Q9BY71 257 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 REG4Q9BYZ8 158 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 ADAM19Q9H013 955 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 TAS2R10Q9NYW0 307 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 USP18Q9UMW8 372 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 CARHSP1Q9Y2V2 147 aaKnown RBP4.01□□□□□ -1.77
NEDD4-201ENST00000338963 NPTNQ9Y639 398 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 NWD1Q149M9 1564 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 PIK3C2BO00750 1634 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 M0R143 59 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 AP4M1O00189 453 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 DPM1O60762 260 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 CRCPO75575 148 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 GDF11O95390 407 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 ANXA1P04083 346 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 THBS1P07996 1170 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 USP17L7P0C7H9 530 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 ADRB3P13945 408 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 IL1RNP18510 177 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 ITGA3P26006 1051 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 XKP51811 444 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 CXADRP78310 365 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 CYP24A1Q07973 514 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 HYAL2Q12891 473 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 C9orf64Q5T6V5 341 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 TDRD10Q5VZ19 366 aaKnown RBP4.01□□□□□ -1.77
NEDD4-201ENST00000338963 STEAP4Q687X5 459 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 PAQR7Q86WK9 346 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 VRK3Q8IV63 474 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 CEP97Q8IW35 865 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 TMEM163Q8TC26 289 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF675Q8TD23 568 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 LPAR1Q92633 364 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 COQ8BQ96D53 544 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 TSPAN17Q96FV3 270 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 TMEM209Q96SK2 561 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 SPATA5L1Q9BVQ7 753 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 MTG2Q9H4K7 406 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 ACP6Q9NPH0 428 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 IL26Q9NPH9 171 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 TAS2R14Q9NYV8 317 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 UBP1Q9NZI7 540 aa4.01□□□□□ -1.77
NEDD4-201ENST00000338963 A0A087X1B8 175 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 I6L893 689 aaPredicted RBP4□□□□□ -1.77
NEDD4-201ENST00000338963 POLRMTO00411 1230 aaKnown RBP4□□□□□ -1.77
NEDD4-201ENST00000338963 CYB561D2O14569 222 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 RECQL4O94761 1208 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 AK1P00568 194 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 MT-ND4LP03901 98 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 FGRP09769 529 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 MYOGP15173 224 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 UGT2B7P16662 529 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 RPL4P36578 427 aaKnown RBP4□□□□□ -1.77
NEDD4-201ENST00000338963 EPHB3P54753 998 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 TWF1Q12792 350 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 GRB7Q14451 532 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 MAD2L1BPQ15013 274 aaPredicted RBP4□□□□□ -1.77
NEDD4-201ENST00000338963 TMEM35AQ53FP2 167 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 HEATR6Q6AI08 1181 aaKnown RBP4□□□□□ -1.77
NEDD4-201ENST00000338963 VASNQ6EMK4 673 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 LRRN1Q6UXK5 716 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 NPSR1Q6W5P4 371 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 HIST2H3AQ71DI3 136 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 MAVSQ7Z434 540 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 B3GNT8Q7Z7M8 397 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 NAA40Q86UY6 237 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 RASGEF1AQ8N9B8 481 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 IL17REQ8NFR9 667 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 FUBP3Q96I24 572 aaKnown RBP eCLIP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms