RNA–Protein interactions for RNA: ENST00000338895.7

DFFB-201, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 2 BASIC

Gene DFFB, Length 3,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-201ENST00000338895 CLIP4Q8N3C7 705 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 CELF5Q8N6W0 485 aaKnown RBP12.48□□□□□ -0.41
DFFB-201ENST00000338895 TAMM41Q96BW9 452 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 ALOXE3Q9BYJ1 711 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 IMPAD1Q9NX62 359 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 SCN3AQ9NY46 2000 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 GPR83Q9NYM4 423 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 NDUFAF4Q9P032 175 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 UGDHO60701 494 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 BCHEP06276 602 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 CISD3P0C7P0 127 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 PRPH2P23942 346 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 MAGEA2P43356 314 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 MAPK12P53778 367 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 MAD2L1BPQ15013 274 aaPredicted RBP12.48□□□□□ -0.41
DFFB-201ENST00000338895 LEXMQ3ZCV2 418 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 NXPE4Q6UWF7 544 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 CEACAM20Q6UY09 585 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 NEK10Q6ZWH5 1172 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 AMZ2Q86W34 360 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 REPS1Q96D71 796 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 ATAD3AQ9NVI7 634 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 TRBV23OR9-2A0A075B6M9 112 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 C1orf226A1L170 272 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 SH3PXD2BA1X283 911 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 C5orf58C9J3I9 102 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 SLC16A6O15403 523 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 OR1F1O43749 312 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 PRAMEF10O60809 474 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 OCM2P0CE71 109 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 OCMP0CE72 109 aaPredicted RBP12.48□□□□□ -0.41
DFFB-201ENST00000338895 IL12RB1P42701 662 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 ST13P50502 369 aaKnown RBP12.48□□□□□ -0.41
DFFB-201ENST00000338895 CLCA4Q14CN2 919 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 DUSP7Q16829 419 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 ZNF829Q3KNS6 432 aaPredicted RBP12.48□□□□□ -0.41
DFFB-201ENST00000338895 ADPRMQ3LIE5 342 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 KLHL17Q6TDP4 642 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 SLC16A12Q6ZSM3 486 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 P2RY8Q86VZ1 359 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 MEX3DQ86XN8 651 aaKnown RBP12.48□□□□□ -0.41
DFFB-201ENST00000338895 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.48□□□□□ -0.41
DFFB-201ENST00000338895 LZICQ8WZA0 190 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 BORCS5Q969J3 196 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 MUL1Q969V5 352 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 C7orf34Q96L11 122 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 IL4I1Q96RQ9 567 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 TUBA1CQ9BQE3 449 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 COPS4Q9BT78 406 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 POLE4Q9NR33 117 aa12.48□□□□□ -0.41
DFFB-201ENST00000338895 ZNF282Q9UDV7 671 aaPredicted RBP12.48□□□□□ -0.41
DFFB-201ENST00000338895 SCN2AQ99250 2005 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 ERAL1O75616 437 aaKnown RBP12.47□□□□□ -0.41
DFFB-201ENST00000338895 FURINP09958 794 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 PTNP21246 168 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 SOX9P48436 509 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 SELENOWP63302 87 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 HNRNPA1L2Q32P51 320 aaKnown RBP12.47□□□□□ -0.41
DFFB-201ENST00000338895 C17orf64Q86WR6 236 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 ENTHD1Q8IYW4 607 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 TERB1Q8NA31 727 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 PHF10Q8WUB8 498 aaKnown RBP12.47□□□□□ -0.41
DFFB-201ENST00000338895 EFCAB11Q9BUY7 163 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 CRISPLD2Q9H0B8 497 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 BRF2Q9HAW0 419 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 TAS2R9Q9NYW1 312 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 TRPC4Q9UBN4 977 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 MAFFQ9ULX9 164 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 PCDHGB3Q9Y5G1 929 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 DENND4CQ5VZ89 1909 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 ZNF701M0R085 212 aaPredicted RBP12.47□□□□□ -0.41
DFFB-201ENST00000338895 PRMT3O60678 531 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 CD36P16671 472 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 IDUAP35475 653 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 ITGA1P56199 1179 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 ELAVL3Q14576 367 aaKnown RBP12.47□□□□□ -0.41
DFFB-201ENST00000338895 DEF8Q6ZN54 512 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 RD3Q7Z3Z2 195 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 FGF13Q92913 245 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 COQ10AQ96MF6 247 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 DOK1Q99704 481 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 ZDHHC5Q9C0B5 715 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 FZD3Q9NPG1 666 aa12.47□□□□□ -0.41
DFFB-201ENST00000338895 LINC01553A4QN01 128 aa12.46□□□□□ -0.41
DFFB-201ENST00000338895 TMEM247A6NEH6 219 aa12.46□□□□□ -0.41
DFFB-201ENST00000338895 PRAMEF25A6NGN4 478 aa12.46□□□□□ -0.41
DFFB-201ENST00000338895 OR52A4PA6NMU1 304 aa12.46□□□□□ -0.41
DFFB-201ENST00000338895 MID1O15344 667 aa12.46□□□□□ -0.41
DFFB-201ENST00000338895 CA3P07451 260 aa12.46□□□□□ -0.41
DFFB-201ENST00000338895 DBTP11182 482 aaKnown RBP12.46□□□□□ -0.41
DFFB-201ENST00000338895 PCMT1P22061 227 aa12.46□□□□□ -0.41
DFFB-201ENST00000338895 DDX6P26196 483 aaKnown RBP eCLIP12.46□□□□□ -0.41
DFFB-201ENST00000338895 P2RY2P41231 377 aa12.46□□□□□ -0.41
DFFB-201ENST00000338895 CTSKP43235 329 aa12.46□□□□□ -0.41
DFFB-201ENST00000338895 SLC35A2P78381 396 aa12.46□□□□□ -0.41
DFFB-201ENST00000338895 ELP6Q0PNE2 266 aa12.46□□□□□ -0.41
DFFB-201ENST00000338895 TOP3AQ13472 1001 aaPredicted RBP12.46□□□□□ -0.41
DFFB-201ENST00000338895 IFI44LQ53G44 452 aa12.46□□□□□ -0.41
DFFB-201ENST00000338895 PRSS36Q5K4E3 855 aa12.46□□□□□ -0.41
DFFB-201ENST00000338895 RNF165Q6ZSG1 346 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms