RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 VPS35Q96QK1 796 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 RAD9AQ99638 391 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 NIPSNAP1Q9BPW8 284 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 LGR4Q9BXB1 951 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 C11orf16Q9NQ32 467 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 DMRT3Q9NQL9 472 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 TAS2R9Q9NYW1 312 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 SLC23A2Q9UGH3 650 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 KLHL20Q9Y2M5 609 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 PCDHGA10Q9Y5H3 936 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 PNMA8CA0A1B0GUJ8 204 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 PPM1DO15297 605 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 PI15O43692 258 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 PRMT3O60678 531 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 UGDHO60701 494 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 SELENOWP63302 87 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 MVKQ03426 396 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 ELP6Q0PNE2 266 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 DNASE1L3Q13609 305 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 MAD2L1BPQ15013 274 aaPredicted RBP9.3□□□□□ -0.92
MSL3-202ENST00000337339 LEXMQ3ZCV2 418 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 KDM4DQ6B0I6 523 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 PSRC1Q6PGN9 363 aaPredicted RBP9.3□□□□□ -0.92
MSL3-202ENST00000337339 DNASE1L2Q92874 299 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 IL23AQ9NPF7 189 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 TAS2R16Q9NYV7 291 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 TMEM9Q9P0T7 183 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 ANAPC1Q9H1A4 1944 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 TRIM64CA6NLI5 447 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 ZNF701M0R085 212 aaPredicted RBP9.3□□□□□ -0.92
MSL3-202ENST00000337339 SLC16A6O15403 523 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 OR10H3O60404 316 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 GADD45GO95257 159 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 STSP08842 583 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 CCDC159P0C7I6 412 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 SLC35G4P0C7Q5 338 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 PTNP21246 168 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 PPIBP23284 216 aaKnown RBP9.3□□□□□ -0.92
MSL3-202ENST00000337339 KCNJ10P78508 379 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 MADCAM1Q13477 382 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 TEAD4Q15561 434 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 SOWAHCQ53LP3 525 aaPredicted RBP9.3□□□□□ -0.92
MSL3-202ENST00000337339 NEK10Q6ZWH5 1172 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 FAM124AQ86V42 546 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 ZNF547Q8IVP9 402 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.3□□□□□ -0.92
MSL3-202ENST00000337339 KRT78Q8N1N4 520 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 CENPSQ8N2Z9 138 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 PPP1R16AQ96I34 528 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 DACH2Q96NX9 599 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 CHCHD6Q9BRQ6 235 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 MIR1-1HGQ9H1L0 117 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 ABCB10Q9NRK6 738 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 TRNAU1APQ9NX07 287 aaKnown RBP9.3□□□□□ -0.92
MSL3-202ENST00000337339 NDUFAF4Q9P032 175 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 ZNF229Q9UJW7 825 aa9.3□□□□□ -0.92
MSL3-202ENST00000337339 KLHL33A6NCF5 533 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 ADAMDEC1O15204 470 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 C8orf89P0DMQ9 161 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 SEPHS1P49903 392 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 RPS3AP61247 264 aaKnown RBP9.29□□□□□ -0.92
MSL3-202ENST00000337339 TUBA3CQ13748 450 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 GBX1Q14549 363 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 ELAVL3Q14576 367 aaKnown RBP9.29□□□□□ -0.92
MSL3-202ENST00000337339 INAQ16352 499 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 DUSP7Q16829 419 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 ADPRMQ3LIE5 342 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 MEX3DQ86XN8 651 aaKnown RBP9.29□□□□□ -0.92
MSL3-202ENST00000337339 AQP11Q8NBQ7 271 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 TAMM41Q96BW9 452 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 C17orf62Q9BQA9 187 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 BRF2Q9HAW0 419 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 EQTNQ9NQ60 294 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 CORO2BQ9UQ03 480 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 SNX11Q9Y5W9 270 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 PRAMEF33A0A0G2JMD5 474 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 LINC00854A0A1B0GVQ3 168 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 NPC1O15118 1278 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 PRAMEF10O60809 474 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 PRKRAO75569 313 aaKnown RBP9.29□□□□□ -0.92
MSL3-202ENST00000337339 TNNI3P19429 210 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 DDX6P26196 483 aaKnown RBP eCLIP9.29□□□□□ -0.92
MSL3-202ENST00000337339 HOXA9P31269 272 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 RYKP34925 604 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 PPM1FP49593 454 aaPredicted RBP9.29□□□□□ -0.92
MSL3-202ENST00000337339 DCDC1P59894 354 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 DGUOKQ16854 277 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 HNRNPA1L2Q32P51 320 aaKnown RBP9.29□□□□□ -0.92
MSL3-202ENST00000337339 C2orf27AQ580R0 203 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 FAM78AQ5JUQ0 283 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 ERN2Q76MJ5 926 aaKnown RBP9.29□□□□□ -0.92
MSL3-202ENST00000337339 TSPYL5Q86VY4 417 aaPredicted RBP9.29□□□□□ -0.92
MSL3-202ENST00000337339 GALNT13Q8IUC8 556 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 YAF2Q8IY57 180 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 SYNPOQ8N3V7 929 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 SVOPQ8N4V2 548 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 PSD4Q8NDX1 1056 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 MUL1Q969V5 352 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 COL26A1Q96A83 441 aa9.29□□□□□ -0.92
MSL3-202ENST00000337339 C12orf66Q96MD2 445 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms